Job Description P46130 Confidence 96.05% Date Thu Jan 5 12:04:05 GMT 2012 Rank 24 Aligned Residues 146 % Identity 28% Template d1idka_ SCOP info Single-stranded right-handed beta-helix Pectin lyase-like Pectin lyase Resolution 1.93

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		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.																																																				.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	T	I	Q	A	A	V	D	A	A	I	I	K	R	T	N	K	R	Q	Y	I	A	V	M	P	G	E	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.												.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.												.
Template Sequence		D	T	I	D	E	L	V	S	Y	L	.	.	.	G	D	D	E	A	R	V	I	V	L	T	.	K	T	F	D	F	T	D	S	E	G	T	T	T	G	T	G	C	A	P	W	G	T	A	S	A	C	Q	V	A	I	D	Q	D	D	W	C	E	N	Y	E	P	D	A	P	S	V	S	V	E	Y	Y	N	A	G	T
Template Known Secondary structure			S									.	.	.		S	S	S								.	S					T	T	T	T										T	T		S	S	T	T	B						G	G	G						S			S									S	S	T	T
Template Predicted Secondary structure												.	.	.												.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.				.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	V	Y	V	P	A	A	P	G	G	I	T	L	Y	G	T	G	E	K	P	I	D	V	K	I	G	L	S	L	D	G	G	M	S	P	A	D	W	R	H	D	V	N	P	R	G	K	Y	M	P	G	K	P	A	W	Y	M	Y	D	S	C	Q	S	K	R	S	D	S	I	G	V	L	C	S	A	V	F	W	S
Query Conservation
Alig confidence									.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	I	T	V	T	S	.	.	.	N	K	S	L	I	G	E	G	S	S	G	A	I	K	G	K	G	L	R	I	V	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S						S	.	.	.	S							T	T	T					S							T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure									.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.				.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	N	N	G	L	Q	L	Q	N	L	T	I	E	N	T	L	G	D	S	V	D	A	G	N	H	P	A	V	A	L	R	T	D	G	D	Q	V	Q	I	N	N	V	N	I	L	G	R	Q	N	T	F	F	V	T	N	S	G	V	Q	N	R	L	E	T	N	R	Q	P	R	T	L	V	T	N	S	Y	I	E	G	D
Query Conservation
Alig confidence		.																							.	.							.																									.	.	.	.	.	.	.	.
Template Conservation		.																							.	.							.																									.	.	.	.	.	.	.	.
Template Sequence		.	A	E	N	I	I	I	Q	N	I	A	V	T	D	I	N	P	K	Y	V	W	G	G	.	.	D	A	I	T	L	D	.	D	C	D	L	V	W	I	D	H	V	T	T	A	R	I	G	R	Q	H	Y	V	L	G	T	.	.	.	.	.	.	.	.	S	A	D	N	R	V	S	L	T	N	N	Y	I	D	G	V
Template Known Secondary structure		.								S								T	T			T	S		.	.		S					.	S								S							S	S		S						.	.	.	.	.	.	.	.		T	T							S						B
Template Predicted Secondary structure		.																							.	.							.																									.	.	.	.	.	.	.	.
Template SS confidence
			132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.			.	.	.	.	.	.		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.									.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		284	.														.	.	.	.	290	.		.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.							.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.							.
Query Sequence		V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	I	V	S	G	R	G	.	A	V	V	F	D	N	T	E	F	R	V	V	N	S	R
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.							.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Conservation
Template Sequence		S	D	Y	S	A	T	C	D	G	Y	H	Y	W	A	I	Y	L	D	G	D	A	D	L	V	T	M	K	G	N	Y	I	Y	H	T	S	G	R
Template Known Secondary structure			S		B	T	T	S	S	S	B	B	S								S	S							S					S	B		S
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions