Job Description P46130 Confidence 97.88% Date Thu Jan 5 12:04:05 GMT 2012 Rank 18 Aligned Residues 249 % Identity 12% Template d1ia5a_ SCOP info Single-stranded right-handed beta-helix Pectin lyase-like Galacturonase Resolution 2.00

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		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	G	P	A	G	T	Q	G	V	T	H	T	T	I	Q	A	A	V	D	A	A	I	I	K	R	T	N	K	R	Q	Y	I	A	V	M	P	G	E	Y	Q	G	T	V	Y	V	P	A	A	P	G	G	I	T	L	Y	G	T	G	E	K	P	I	D	V	K	I	G	L	S	L	D	G	G	M	S	P	A	D	W
Query Conservation
Alig confidence											.	.																			.	.	.									.	.	.																	.	.	.	.
Template Conservation											.	.																			.	.	.									.	.	.																	.	.	.	.
Template Sequence		T	C	T	F	S	G	S	N	G	.	.	A	S	S	A	S	K	S	K	T	S	C	S	T	I	V	L	S	N	.	.	.	V	A	V	P	S	G	T	T	.	.	.	L	D	L	T	K	L	N	D	G	T	H	V	I	F	S	G	.	.	.	.	E	T	T	F	G	Y	K	E	W	S	G	P	L	I	S	V	S
Template Known Secondary structure							G	G	G		.	.								G	G	G		S						S	.	.	.					T	T			.	.	.					S			T	T							S	.	.	.	.									S				S
Template Predicted Secondary structure											.	.																			.	.	.									.	.	.																	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.			.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.				30	.	.	.	.	.	.	.				.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.					.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	H	D	V	N	P	R	G	K	Y	M	P	G	K	P	A	W	Y	M	Y	D	S	C	Q	S	K	R	S	D	S	I	G	V	L	C	S	A	V	F	W	S	Q	N	N	G	L	Q	L	Q	N	L	T	I	E	N	T	L	G	D	S	V	D	A	G	N	H	P	A	V	A	L	R	T	D	G	D	Q	V	Q	I
Query Conservation
Alig confidence												.																																																			.	.	.	.	.	.	.	.	.
Template Conservation												.																																																			.	.	.	.	.	.	.	.	.
Template Sequence		G	S	D	L	T	I	T	G	A	S	.	G	H	S	I	N	G	D	G	S	R	W	W	D	G	E	G	G	N	G	G	K	T	K	P	K	F	F	A	A	H	S	L	T	N	S	V	I	S	G	L	K	I	V	N	S	P	V	Q	V	F	.	.	.	.	.	.	.	.	.	S	V	A	G	S	D	Y	L	T	L
Template Known Secondary structure				S							T	.	T							G	G	G	T		S	S		T	T	T	S	S	S																		S							S	S				.	.	.	.	.	.	.	.	.				S
Template Predicted Secondary structure												.																																																			.	.	.	.	.	.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130										.	.	.	.	.	.	.	.	.	140
		243	.	.	.	.	.	.	250	.										.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.			.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.																																						.	.
Query SS confidence											.	.	.	.	.	.	.	.	.																																						.	.
Query Sequence		N	N	V	N	I	L	G	R	Q	.	.	.	.	.	.	.	.	.	N	T	F	F	V	T	N	S	G	V	Q	N	R	L	E	T	N	R	Q	P	R	T	L	V	T	N	S	Y	I	E	G	D	V	D	I	V	S	.	.	G	R	G	A	V	V	F	D	N	T	E	F	R	V	V	N	S	R	T	Q	Q	E	A
Query Conservation											.	.	.	.	.	.	.	.	.																																						.	.
Alig confidence											.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.																						.	.														.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.
Template Sequence		K	D	I	T	I	D	N	S	D	G	D	D	N	G	G	H	N	T	D	A	F	D	I	.	.	.	.	.	.	.	.	.	.	.	G	T	S	T	Y	V	T	I	S	G	A	T	V	Y	N	Q	D	D	C	V	A	V	N	S	G	E	N	I	Y	F	S	G	G	Y	C	S	.	.	.	.	G	G	H	G	L	S
Template Known Secondary structure			S						G	G	G	T	T	T	T			S			S				.	.	.	.	.	.	.	.	.	.	.		S								S						S	S		S				S	S								S					.	.	.	.	S	S	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.												.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.					200	.	.	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	F	A	P	A	T	L	S	N	I	Y	Y	G	F	L	A	V	N	S	R	F	N	A	F	G	D	G	V	A	Q	L	G	R	S	L	D	V	D	A	N	T	N	G	Q	V	V	I	R	D	S	A	I	N	E	G	F	N	T
Query Conservation
Alig confidence																																													.	.
Template Conservation																																													.	.
Template Sequence		I	G	S	V	G	G	R	S	D	N	T	V	K	N	V	T	F	V	D	S	T	I	I	N	S	D	N	G	V	R	I	K	T	N	I	D	T	T	G	S	V	S	D	.	.	V	T	Y	K	D	I	T	L	T	S	I	A	K	Y
Template Known Secondary structure							S	S	S																S		S									T	T								.	.												S	S
Template Predicted Secondary structure																																													.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.			.	250	.	.	.	.	.	.	.	.	.	260	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions