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Job DescriptionP46130
Confidence97.97%DateThu Jan 5 12:04:05 GMT 2012
Rank17Aligned Residues250
% Identity15%Templated1hg8a_
SCOP infoSingle-stranded right-handed beta-helix Pectin lyase-like Galacturonase
Resolution1.73

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   93......100.........110.........120.........130.........140.........150 .........160.........
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Query Sequence  THTTIQAAVDAAIIKRTNKRQYIAVMPGEYQGTVYVPAAPGGITLYGTGEKPIDVKIG. . . LSLDGGMSPADWRHDVNPR
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Template Sequence  EYSGLATAVSSCKNIVLNG. . . FQVPTGKQLDLSSL. QNDSTVTFKG. . . . . . TTTFATTADNDFNPIVISGSNITITGA
Template Known Secondary structure  SGGG
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   31........40......... 50.........60... ......70... ......80.........90.........100
 
   170.........180.........190.........200.........210.........220.........230.........240.........
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Query Sequence  GKYMPGKPAWYMYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDQVQINNVNILG
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Template Sequence  SGHVIDGNGQAYWDGKGSNSNSNQKPDHFIVVQKTTGNSKITNLNIQNWPV. . . . . . . . HCFDI. TGSSQLTISGLILDN
Template Known Secondary structure  TT


GGGT

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   101........110.........120.........130.........140.........150. ..... ...160.........170.
 
   250.........260.. .......270.........280....... ..290.........300.........310.........320.
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Query Sequence  RQNTFFVTNSGVQ. . . . . . NRLETNRQPRTLVTNSYIEGDVDIV. . SGRGAVVFDNTEFRVVNSRTQQEAYVFAPATLSN
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Template Sequence  RAGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYNQDDCVAVTSGTNIVVSNMYCS. . . . GGHGLSIGSVGGKSDN
Template Known Secondary structure  GGGSS

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   172.......180.........190.........200.........210.........220.........230. ........240.......
 
   322.......330.........340.........350.........360.......
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Query Sequence  IYYGFLAVNSRFNAFGDGVAQLGRSLDVDANTNGQVVIRDSAINEG
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Template Sequence  VVDGVQFLSSQVVNSQNGCRI. . KSNSGATGTINNVTYQNIALTNI
Template Known Secondary structure  ..TT

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   248.250.........260........ .270.........280.........290.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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