Job Description P46130 Confidence 97.97% Date Thu Jan 5 12:04:05 GMT 2012 Rank 17 Aligned Residues 250 % Identity 15% Template d1hg8a_ SCOP info Single-stranded right-handed beta-helix Pectin lyase-like Galacturonase Resolution 1.73

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		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150				.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.
Query SS confidence																																																												.	.	.
Query Sequence		T	H	T	T	I	Q	A	A	V	D	A	A	I	I	K	R	T	N	K	R	Q	Y	I	A	V	M	P	G	E	Y	Q	G	T	V	Y	V	P	A	A	P	G	G	I	T	L	Y	G	T	G	E	K	P	I	D	V	K	I	G	.	.	.	L	S	L	D	G	G	M	S	P	A	D	W	R	H	D	V	N	P	R
Query Conservation																																																												.	.	.
Alig confidence																					.	.	.															.											.	.	.	.	.	.						.	.	.
Template Conservation																					.	.	.															.											.	.	.	.	.	.
Template Sequence		E	Y	S	G	L	A	T	A	V	S	S	C	K	N	I	V	L	N	G	.	.	.	F	Q	V	P	T	G	K	Q	L	D	L	S	S	L	.	Q	N	D	S	T	V	T	F	K	G	.	.	.	.	.	.	T	T	T	F	A	T	T	A	D	N	D	F	N	P	I	V	I	S	G	S	N	I	T	I	T	G	A
Template Known Secondary structure		S	G	G	G									S							.	.	.					T	T						T	T		.		T	T							S	.	.	.	.	.	.										T	T			S							S
Template Predicted Secondary structure																					.	.	.															.											.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.							.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	Y	M	P	G	K	P	A	W	Y	M	Y	D	S	C	Q	S	K	R	S	D	S	I	G	V	L	C	S	A	V	F	W	S	Q	N	N	G	L	Q	L	Q	N	L	T	I	E	N	T	L	G	D	S	V	D	A	G	N	H	P	A	V	A	L	R	T	D	G	D	Q	V	Q	I	N	N	V	N	I	L	G
Query Conservation
Alig confidence																																																					.	.	.	.	.	.	.	.						.
Template Conservation																																																					.	.	.	.	.	.	.	.						.
Template Sequence		S	G	H	V	I	D	G	N	G	Q	A	Y	W	D	G	K	G	S	N	S	N	S	N	Q	K	P	D	H	F	I	V	V	Q	K	T	T	G	N	S	K	I	T	N	L	N	I	Q	N	W	P	V	.	.	.	.	.	.	.	.	H	C	F	D	I	.	T	G	S	S	Q	L	T	I	S	G	L	I	L	D	N
Template Known Secondary structure		T	T							G	G	G	T			S		T	T		T	T	S					S										S	S					S							S	S	.	.	.	.	.	.	.	.						.		S
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.						.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.									.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		250	.	.	.	.	.	.	.	.	.	260	.	.							.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.			.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure															.	.	.	.	.	.																										.	.
Query SS confidence															.	.	.	.	.	.																										.	.
Query Sequence		R	Q	N	T	F	F	V	T	N	S	G	V	Q	.	.	.	.	.	.	N	R	L	E	T	N	R	Q	P	R	T	L	V	T	N	S	Y	I	E	G	D	V	D	I	V	.	.	S	G	R	G	A	V	V	F	D	N	T	E	F	R	V	V	N	S	R	T	Q	Q	E	A	Y	V	F	A	P	A	T	L	S	N
Query Conservation															.	.	.	.	.	.																										.	.
Alig confidence															.	.	.	.	.	.																										.	.															.	.	.	.
Template Conservation																																																														.	.	.	.
Template Sequence		R	A	G	D	K	P	N	A	K	S	G	S	L	P	A	A	H	N	T	D	G	F	D	I	S	S	S	D	H	V	T	L	D	N	N	H	V	Y	N	Q	D	D	C	V	A	V	T	S	G	T	N	I	V	V	S	N	M	Y	C	S	.	.	.	.	G	G	H	G	L	S	I	G	S	V	G	G	K	S	D	N
Template Known Secondary structure		G	G	G	S	S			T	T	T	T	T	S		S			S			S					S														S	S		S				S	S													.	.	.	.	S	S									S	S	S	S
Template Predicted Secondary structure																																																														.	.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.					.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	Y	G	F	L	A	V	N	S	R	F	N	A	F	G	D	G	V	A	Q	L	G	R	S	L	D	V	D	A	N	T	N	G	Q	V	V	I	R	D	S	A	I	N	E	G
Query Conservation
Alig confidence																							.	.
Template Conservation																							.	.
Template Sequence		V	V	D	G	V	Q	F	L	S	S	Q	V	V	N	S	Q	N	G	C	R	I	.	.	K	S	N	S	G	A	T	G	T	I	N	N	V	T	Y	Q	N	I	A	L	T	N	I
Template Known Secondary structure																							.	.				T	T
Template Predicted Secondary structure																							.	.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.			.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions