Job Description P46130 Confidence 100.00% Date Thu Jan 5 12:04:05 GMT 2012 Rank 2 Aligned Residues 271 % Identity 30% Template d1gq8a_ SCOP info Single-stranded right-handed beta-helix Pectin lyase-like Pectin methylesterase Resolution 1.75

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		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	P	A	Q	P	D	F	V	V	G	P	A	G	T	Q	G	V	T	H	T	T	I	Q	A	A	V	D	A	A	I	I	K	R	T	N	K	R	Q	Y	I	A	V	M	P	G	E	Y	Q	G	T	V	Y	V	P	A	A	P	G	G	I	T	L	Y	G	T	G	E	K	P	I	D	V	K	I	G	L	S	L	D
Query Conservation
Alig confidence																			.	.										.																																									.	.
Template Conservation																			.	.										.																																									.	.
Template Sequence		S	S	T	V	G	P	N	V	V	V	A	A	D	G	S	G	D	.	.	Y	K	T	V	S	E	A	V	A	.	A	A	P	E	D	S	K	T	R	Y	V	I	R	I	K	A	G	V	Y	R	E	N	V	D	V	P	K	K	K	K	N	I	M	F	L	G	D	G	R	T	.	.	S	T	I	I	T	A	S	K	N
Template Known Secondary structure				S	S			S					T	T	S		S	S	.	.	B	S	S							.		S		S	S		S	S								S											T	T			S						S		T	T	.	.	T
Template Predicted Secondary structure																			.	.										.																																									.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.			.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	M	S	P	A	D	W	R	H	D	V	N	P	R	G	K	Y	M	P	G	K	P	A	W	Y	M	Y	D	S	C	Q	S	K	R	S	D	S	I	G	V	L	C	S	A	V	F	W	S	Q	N	N	G	L	Q	L	Q	N	L	T	I	E	N	T	L	G	D	S	V	D	A	G	N	H	P	A	V	A	L	R
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.
Template Sequence		V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	D	G	S	T	T	F	N	S	A	T	V	A	A	V	G	A	G	F	L	A	R	D	I	T	F	Q	N	T	A	G	.	.	.	.	A	A	K	H	Q	A	V	A	L	R
Template Known Secondary structure		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T			T	G	G	G		S					S	T	T														.	.	.	.	G	G	G					S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.
Template SS confidence
		77																																			.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.					.	110	.	.	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	G	D	Q	V	Q	I	N	N	V	N	I	L	G	R	Q	N	T	F	F	V	T	N	S	G	V	Q	N	R	L	E	T	N	R	Q	P	R	T	L	V	T	N	S	Y	I	E	G	D	V	D	I	V	S	G	R	G	A	V	V	F	D	N	T	E	F	R	V	V	N	S	R	T	Q	Q	E	A	Y	V	F
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	G	S	D	L	S	A	F	Y	R	C	D	I	L	A	Y	Q	D	S	L	Y	V	.	.	.	.	.	.	.	.	.	.	.	.	H	S	N	R	Q	F	F	I	N	C	F	I	A	G	T	V	D	F	I	F	G	N	A	A	V	V	L	Q	D	C	D	I	H	A	R	R	P	G	S	G	Q	K	N	M	V	T
Template Known Secondary structure					T	T											S	T	T					.	.	.	.	.	.	.	.	.	.	.	.		S	S						S						S	S	S					S							S									S	T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140													.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		315	.	.		.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.								.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure					.																						.	.	.	.	.	.	.
Query SS confidence					.																						.	.	.	.	.	.	.
Query Sequence		A	P	A	.	T	L	S	N	I	Y	Y	G	F	L	A	V	N	S	R	F	N	A	F	G	D	.	.	.	.	.	.	.	G	V	A	Q	L	G	R	S	L	D	V	D	A	N	T	N	G	Q	V	V	I	R	D	S	A	I	N	E	G	F	N	T	A	K	P	W	A	D	A	V	I	S	N	R	P	F	A	G
Query Conservation					.																						.	.	.	.	.	.	.
Alig confidence					.																						.	.	.	.	.	.	.															.	.	.	.																	.								.	.	.	.	.	.
Template Conservation																																																.	.	.	.																	.								.	.	.	.	.	.
Template Sequence		A	Q	G	R	T	D	P	N	Q	N	T	G	I	V	I	Q	K	S	R	I	G	A	T	S	D	L	Q	P	V	Q	S	S	F	P	T	Y	L	G	R	P	W	K	E	Y	S	R	.	.	.	.	T	V	V	M	Q	S	S	I	T	N	V	I	N	P	A	G	.	W	F	P	W	D	G	N	.	.	.	.	.	.
Template Known Secondary structure							S	T	T									S							T	T	T	G	G	G	G	G	G	S								S	S	T	T			.	.	.	.					S					T	T	B		T	T		.				S	S	T	T	.	.	.	.	.	.
Template Predicted Secondary structure																																																.	.	.	.																	.								.	.	.	.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.					.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.		.	250	.	.	.	.	.
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	G	S	V	D	D	N	D	E	I	Q	R	N	L	N	D	T	N	Y	N	R	M	W	E	Y	N	N	R	G	V	G	S	K	V	V	A	E	A	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	L	D	T	L	Y	Y	G	E	Y	Q	N	T	G	A	G	A	A	T	S	G	R	V	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T	T							S		B	S	G	G	G			T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																	256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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