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Job DescriptionP46130
Confidence94.99%DateThu Jan 5 12:04:05 GMT 2012
Rank27Aligned Residues140
% Identity18%Templated1bn8a_
SCOP infoSingle-stranded right-handed beta-helix Pectin lyase-like Pectate lyase-like
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   95....100.........110.........120...
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Query Sequence  TTIQAAVDAAIIKRTNKRQYIAVMPGEYQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  SNRNQLVSALGKETNTTPKIIYI. KGTIDMNVDDNLKPLGLNDYKDPEYDLDKYLKAYDPSTWGKKEPSGTQEEARARSQ
Template Known Secondary structure 
S

TT

S
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SSSB
TT

B



TT

T

SS


S
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   36...40.........50........ .60.........70.........80.........90.........100.........110....
 
   124.....130.........140.........150.........160.........170.........180.........190.......
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Query Sequence  . . . . . . GTVYVPAAPGGITLYGTGEKPIDVKIGLSLDGGMSPADWRHDVNPRGKYMPGKPAWYMYDSCQSKRSDSIGVLC
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Template Sequence  KNQKARVMVDIPA. . . NTTIVGSGTN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AKVV
Template Known Secondary structure 
S...S
TT
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   115....120....... ..130....... ..140.
 
   198.200.........210.........220.... .....230.........240.........250.........260......
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Query Sequence  SAVFWSQNNGLQLQNLTIENTLGDSVD. . . . . . . . . . . AGNHPAVALRTDGDQVQINNVNILGRQNTFFVTNSGVQNRLE
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Template Sequence  GGNFQIKSDNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITIN. GGTHIWIDHCTFNDGSRPDSTSPK. . . . . . .
Template Known Secondary structure  S

SS




SS
TTSSSS




S.S
S

TT

GGG

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   142.......150.........160.........170.........180......... 190.........200.........210...
 
   267..270.........280.........290.........300.
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Query Sequence  TNRQPRTLVTNSYIEGDVDIVSGRGAVVFDNTEFR
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Template Sequence  . . YYGRKYQH. . . HDGQTDASNGANYITMSYNYYH
Template Known Secondary structure  ..TT


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STT
S
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   214.....220. ........230.........240...
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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