Job Description P46130 Confidence 98.74% Date Thu Jan 5 12:04:05 GMT 2012 Rank 8 Aligned Residues 284 % Identity 11% Template d1bhea_ SCOP info Single-stranded right-handed beta-helix Pectin lyase-like Galacturonase Resolution 1.90

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		70	.	.	.	.	.	.	.	.	.	80			.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure													.	.																																																				.													.	.	.
Query SS confidence													.	.																																																				.													.	.	.
Query Sequence		N	P	S	P	I	T	L	P	A	Q	P	.	.	D	F	V	V	G	P	A	G	T	Q	G	V	T	H	T	T	I	Q	A	A	V	D	A	A	I	I	K	R	T	N	K	R	Q	Y	I	A	V	M	P	G	E	Y	Q	G	T	V	Y	V	P	A	A	.	P	G	G	I	T	L	Y	G	T	G	E	K	.	.	.
Query Conservation													.	.																																																				.													.	.	.
Alig confidence													.	.												.	.																.	.	.	.	.																			.													.	.	.
Template Conservation																										.	.																.	.	.	.	.
Template Sequence		D	S	R	T	V	S	E	P	K	T	P	S	S	C	T	T	L	K	A	D	S	S	T	A	.	.	T	S	T	I	Q	K	A	L	N	N	C	D	Q	G	K	.	.	.	.	.	A	V	R	L	S	A	G	S	T	S	V	F	L	S	G	P	L	S	L	P	S	G	V	S	L	L	I	D	K	G	V	T	L	R
Template Known Secondary structure			S	S																		S	S	B		.	.									T	T			T	T		.	.	.	.	.							S	S	S	S					S						T	T							T	T
Template Predicted Secondary structure																										.	.																.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40						.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
																									144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	I	D	V	K	I	G	L	S	L	D	G	G	M	S	P	A	D	W	R	H	D	V	N	P	R	G	K	Y	M	P	G	K	P	A	W	Y	M	Y	D	S	C	Q	S	K	R	S	D	S	I	G	V	L	C	S	A	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	V	N	N	A	K	S	F	E	N	A	P	S	S	C	G	V	V	D	K	N	G	K	G	C	D	A	F	I	T	A	V	S	T	T	N	S	G	I	Y	G	P	G	T	I	D	G	Q	G	G	V	K	L	Q	D	K	K	V	S	W	W	E	L	A	A	D	A	K	V	K	K	L	K	Q	N	T	P	R	L	I
Template Known Secondary structure				S		S	G	G	G	B	S	S	T	T		S	S				S		S			B			S					S		B	S						S	S						T	T	S			S	S	S	S	S		T	T										T								S
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.																			.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	W	S	Q	N	N	G	L	Q	L	Q	N	L	T	I	E	N	T	L	G	D	S	V	D	A	G	N	H	P	A	V	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	T	D	G	D	Q	V	Q	I	N	N	V	N	I	L	G	R	Q	N	T	F	F	V	T	N	S	G	V	Q
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	I	N	K	S	K	N	F	T	L	Y	N	V	S	L	I	N	S	P	N	F	H	V	V	F	S	D	G	D	G	F	T	A	W	K	T	T	I	K	T	P	S	T	A	R	N	T	D	G	I	D	P	M	S	S	K	N	I	T	I	A	Y	S	N	I	A	T	G	D	D	N	V	A	I	K	A	Y	K	G	R
Template Known Secondary structure					S															S	S		S					S															T	T		S	S			S					S								S						S	S		S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.		.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		N	R	L	E	T	N	R	Q	P	R	T	L	V	T	N	S	Y	I	E	G	D	V	D	I	V	S	G	R	G	A	V	V	F	D	N	T	E	F	R	V	V	N	S	R	T	Q	Q	E	A	Y	V	F	A	P	A	.	T	L	S	N	I	Y	Y	G	F	L	A	V	N	S	R	F	N	A	F	G	D	G	V	A
Query Conservation																																																									.
Alig confidence			.	.	.	.	.																																																		.																		.	.
Template Conservation			.	.	.	.	.																																																																				.	.
Template Sequence		A	.	.	.	.	.	E	T	R	N	I	S	I	L	H	N	D	F	G	T	G	H	G	M	S	I	G	S	E	T	M	G	V	Y	N	V	T	V	D	D	L	K	M	N	G	T	T	N	G	L	R	I	K	S	D	K	S	A	A	G	V	V	N	G	V	R	Y	S	N	V	V	M	K	.	.	N	V	A	K	P
Template Known Secondary structure			.	.	.	.	.														S	S	S									S	S													S		S									T	T	T																.	.	S		S
Template Predicted Secondary structure			.	.	.	.	.																																																																				.	.
Template SS confidence
		235						.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.			.	.	.	.	.
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	G	R	S	L	D	V	D	A	N	T	N	G	Q	V	V	I	R	D	S	A	I	N	E	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	V	I	D	T	V	Y	E	K	K	E	G	S	N	V	P	D	W	S	D	I	T	F	K	D	V
Template Known Secondary structure						T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions