Job Description P46130 Confidence 97.73% Date Thu Jan 5 12:04:05 GMT 2012 Rank 19 Aligned Residues 256 % Identity 14% Template c3jurA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:exo-poly-alpha-d-galacturonosidase; PDBTitle: the crystal structure of a hyperthermoactive exopolygalacturonase from2 thermotoga maritima Resolution 2.05 Å

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		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	A	A	V	D	A	A	I	I	K	R	T	N	K	R	Q	Y	I	A	V	M	P	G	E	Y	Q	G	T	V	Y	V	P	A	A	P	G	G	I	T	L	Y	G	T	G	E	K	P	I	D	V	K	I	G	L	S	L	D	G	G	M	S	P	A	D	W	R	H	D	V	N	P	R	G	K	Y	M	P	G	K
Query Conservation
Alig confidence																.	.	.																.	.												.	.	.	.
Template Conservation																.	.	.																.	.												.	.	.	.
Template Sequence		F	K	R	A	I	E	E	L	S	K	Q	G	G	G	.	.	.	R	L	I	V	P	E	G	V	F	L	T	G	P	I	H	.	.	L	K	S	N	I	E	L	H	V	K	G	.	.	.	.	T	I	K	F	I	P	D	P	E	R	Y	L	P	V	V	L	T	R	F	E	G	I	E	L	Y	N	Y	S	P	L	V
Template Known Secondary structure													T			.	.	.						S	S					S				.	.			T	T						S	S	.	.	.	.								G	G	G	G		S							T	T						S			S
Template Predicted Secondary structure																.	.	.																.	.												.	.	.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60				.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.					.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.																																																					.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	A	W	Y	M	Y	D	S	C	Q	S	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	S	D	S	I	G	V	L	C	S	A	V	F	W	S	Q
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	A	L	D	C	E	N	V	A	I	T	G	S	G	V	L	D	G	S	A	D	N	E	H	W	W	P	W	K	G	K	K	D	F	G	W	K	E	G	L	P	N	Q	Q	E	D	V	K	K	L	K	E	M	A	E	R	G	T	P	V	E	E	R	V	F	G	K	G	H	Y	L	R	P	S	F	V	Q	F	Y	R
Template Known Secondary structure					S								S	S								B	T	T	B	B	G	G	G	G			G	G	G	T			T	T	S			S														T			G	G	G		B		S	T	T							S					S
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.																	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	N	G	L	Q	L	Q	N	L	T	I	E	N	T	L	G	D	S	V	D	A	G	N	H	P	A	V	A	L	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	D	Q	V	Q	I	N	N	V	N	I	L	G	R	Q	N	T	F	F	V	T	N	S	G	V	Q	N	R	L	E	T	N
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	R	N	V	L	V	E	G	V	K	I	I	N	S	P	M	W	C	I	H	P	V	L	S	E	N	V	I	I	R	N	I	E	I	S	S	T	G	P	N	N	D	G	I	D	P	E	S	C	K	Y	M	L	I	E	K	C	R	F	D	T	G	D	D	S	V	V	I	K	S	G	R	D	A	D	G	R	R	I	G
Template Known Secondary structure									S					S		S	S		S					S								S							S	T	T			S	B			B	S								S						S	S						B
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		269	270	.	.	.		.	.	.	.	.	.	280	.	.	.	.	.				.	.	.	.	290	.	.							.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure							.													.	.	.								.	.	.	.	.	.
Query SS confidence							.													.	.	.								.	.	.	.	.	.
Query Sequence		R	Q	P	R	T	.	L	V	T	N	S	Y	I	E	G	D	V	D	.	.	.	I	V	S	G	R	G	A	.	.	.	.	.	.	V	V	F	D	N	T	E	F	R	V	V	N	S	R	T	Q	Q	E	A	Y	V	F	A	P	A	T	L	S	N	I	Y	Y	G	F	L	A	V	N	S	R	F	N	A	F	G	D
Query Conservation							.													.	.	.								.	.	.	.	.	.
Alig confidence							.													.	.	.								.	.	.	.	.	.										.	.	.	.
Template Conservation																																													.	.	.	.
Template Sequence		V	P	S	E	Y	I	L	V	R	D	N	L	V	I	S	Q	A	S	H	G	G	L	V	I	G	S	E	M	S	G	G	V	R	N	V	V	A	R	N	N	V	Y	M	.	.	.	.	N	V	E	R	A	L	R	L	K	T	N	S	R	R	G	G	Y	M	E	N	I	F	F	I	D	N	V	A	V	N	V	S	E
Template Known Secondary structure											S						S	S		S							S	S		T	T									S					.	.	.	.	S		S									T	T	T		S									S							S	S
Template Predicted Secondary structure																																													.	.	.	.
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320					.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	A	Q	L	G	R	S	L	D	V	D	A	N	T	N	G	Q	V	V	I	R	D	S	A	I	N	E
Query Conservation
Alig confidence												.
Template Conservation												.
Template Sequence		E	V	I	R	I	N	L	R	Y	D	.	N	E	E	G	E	Y	L	P	V	V	R	S	V	F	V	K	N
Template Known Secondary structure								S		G	G	.	G				S												S
Template Predicted Secondary structure												.
Template SS confidence
		354	.	.	.	.	.	360	.	.	.		.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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