Job Description P46130 Confidence 98.00% Date Thu Jan 5 12:04:05 GMT 2012 Rank 15 Aligned Residues 241 % Identity 16% Template c2uveA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:exopolygalacturonase; PDBTitle: structure of yersinia enterocolitica family 282 exopolygalacturonase Resolution 2.19 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	G	T	Q	G	V	T	H	T	T	I	Q	A	A	V	D	A	A	I	I	K	R	T	N	K	R	Q	Y	I	A	V	M	P	G	E	Y	Q	G	T	V	Y	V	P	A	A	P	G	G	I	T	L	Y	G	T	G	E	K	P	I	D	V	K	I	G	L	S	L	D	G	G	M	S	P	A	D	W	R	H	D
Query Conservation
Alig confidence								.																	.	.	.	.	.																.	.												.	.	.	.
Template Conservation								.																	.	.	.	.	.																.	.												.	.	.	.
Template Sequence		D	D	G	K	T	L	.	N	T	K	A	I	Q	Q	A	I	D	S	C	K	P	G	C	.	.	.	.	.	R	V	E	I	P	A	G	T	Y	K	S	G	A	L	W	.	.	L	K	S	D	M	T	L	N	L	Q	A	.	.	.	.	G	A	I	L	L	G	S	E	N	P	D	D	Y	P	A	G	Y	R	L	Y
Template Known Secondary structure			S	S	S		B	.											T			T	T		.	.	.	.	.						S										.	.			S	S							T	.	.	.	.	T							S		G	G	G	S						S	S
Template Predicted Secondary structure								.																	.	.	.	.	.																.	.												.	.	.	.
Template SS confidence
		166	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.						.	.	190	.	.	.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.					.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	N	P	R	G	K	Y	M	P	G	K	P	A	W	Y	M	Y	D	S	C	Q	S	K	R	S	D	S	I	G	V	L	C	S	A	V	F	W	S	Q	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	Y	S	T	I	E	R	P	A	S	L	I	N	A	I	D	P	N	N	S	K	P	G	T	F	R	N	I	R	I	T	G	S	G	V	I	D	G	N	G	W	L	R	A	K	T	A	E	I	T	D	E	L	G	R	S	L	P	Q	Y	V	A	S	K	N	S	K	V	H	E	D	G	I	L	A	K	N	Q	V	E
Template Known Secondary structure		T	T			S						S						S	S			S	T	T	S								S	S								B											T	T	S											T	T	T					B	S
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
																												206	.	.	.	210	.	.	.	.	.	.	.	.	.	220																			.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	L	Q	L	Q	N	L	T	I	E	N	T	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	V	D	A	G	N	H	P	A	V	A	L	R	T	D	G	D	Q	V	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation																																																																										.
Template Sequence		K	A	V	S	D	G	M	D	L	K	N	A	Y	G	Q	R	R	S	S	L	M	T	L	R	G	V	E	N	V	Y	L	A	G	F	T	V	R	N	P	A	F	H	G	I	M	N	L	E	N	H	N	V	V	A	N	G	L	I	H	Q	T	Y	D	A	N	N	G	D	G	I	E	F	.	G	N	S	Q	N	V	M
Template Known Secondary structure						T	T										S	S			S					S								S							S	S		S					S								S						T	T		T	T			S				.		S
Template Predicted Secondary structure																																																																										.
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.		.	.	.	.	390	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.		.	.	.	.	.	.	.	.	290							.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																																										.										.	.	.	.	.	.
Query SS confidence																																										.										.	.	.	.	.	.
Query Sequence		I	N	N	V	N	I	L	G	R	Q	N	T	F	F	V	T	N	S	G	V	Q	N	R	L	E	T	N	R	Q	P	R	T	L	V	T	N	S	Y	I	E	.	G	D	V	D	I	V	S	G	R	.	.	.	.	.	.	G	A	V	V	F	D	N	T	E	F	R	V	V	N	S	R	T	Q	Q	E	A	Y	V	F
Query Conservation																																										.										.	.	.	.	.	.
Alig confidence																																										.										.	.	.	.	.	.											.	.	.
Template Conservation																																																																				.	.	.
Template Sequence		V	F	N	N	F	F	D	T	G	D	D	C	I	N	F	A	A	G	T	G	E	K	A	Q	E	Q	E	P	M	K	G	A	W	L	F	N	N	Y	F	R	M	G	H	G	A	I	V	T	G	S	H	T	G	A	W	I	E	D	I	L	A	E	N	N	V	M	.	.	.	Y	L	T	D	I	G	L	R	A	K	S
Template Known Secondary structure				S						S	S		S								S	T	T	G	G	G	S										S					S	S	S		S					S			T	T									S				.	.	.		S		S
Template Predicted Secondary structure																																																																				.	.	.
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.				.	460	.	.	.	.	.	.	.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	A	T	L	S	N	I	Y	Y	G	F	L	A	V	N	S	R	F	N	A	F	G	D	G	V	A	Q	L
Query Conservation
Alig confidence											.
Template Conservation											.
Template Sequence		T	S	T	I	G	G	G	A	R	.	N	V	T	F	R	N	N	A	M	R	D	L	A	K	Q	V	M	V	M
Template Known Secondary structure			G	G	G						.													S	S
Template Predicted Secondary structure											.
Template SS confidence
		470	.	.	.	.	.	.	.	.		.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions