Job Description P46130 Confidence 96.42% Date Thu Jan 5 12:04:05 GMT 2012 Rank 23 Aligned Residues 136 % Identity 21% Template c2qy1B_ PDB info PDB header:lyase Chain: B: PDB Molecule:pectate lyase ii; PDBTitle: pectate lyase a31g/r236f from xanthomonas campestris Resolution 1.90 Å

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		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.																.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	T	I	Q	A	A	V	D	A	A	I	I	K	R	T	N	K	R	Q	Y	I	A	V	M	P	G	E	Y	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	V	Y	V	P	A	A	P	G	G	I	T	L	Y	G	T	G	E	K	P	I	D	V	K	I	G	L	S	L	D	G	G	M	S	P
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.																																												.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	T	F	E	A	.	M	Q	S	A	I	D	S	Y	S	G	S	G	G	L	V	L	N	Y	T	G	K	F	D	F	G	T	I	K	D	V	C	A	Q	W	K	L	P	A	K	T	V	Q	I	.	K	N	K	S	D	V	T	I	K	G	A	N	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S				.								S		S	S	S									B			G	G	G				G	G	G	S	T	T	S								.		S			S							T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.																																												.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		44	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.
Predicted Secondary structure																																																																															.
Query SS confidence																																																																															.
Query Sequence		A	D	W	R	H	D	V	N	P	R	G	K	Y	M	P	G	K	P	A	W	Y	M	Y	D	S	C	Q	S	K	R	S	D	S	I	G	V	L	C	S	A	V	F	W	S	Q	N	N	G	L	Q	L	Q	N	L	T	I	E	N	T	L	G	D	S	V	D	A	G	N	H	P	A	V	A	L	R	T	D	.	G	D
Query Conservation																																																																															.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.															.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	N	F	G	I	R	V	V	G	N	A	H	N	V	I	I	Q	N	M	T	I	G	L	L	Q	G	G	.	E	D	A	D	S	I	S	L	E	G	N	S	S	G	E	P	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B	B	S	S						S	S								S					S		S	S	G	.	G	G			S						B	T	T	B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template SS confidence
																																				106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	Q	I	N	N	V	N	I	L	G	R	Q	N	T	F	F	V	T	N	S	G	V	Q	N	R	L	E	T	N	R	Q	P	R	T	L	V	T	N	S	Y	I	E	G	D	V	D	I	V	S	G	R	G	A	V	V	F	D	N	T	E	F	R
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	W	V	D	H	N	T	V	F	A	S	L	T	K	C	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	D	A	S	F	D	G	G	I	D	M	K	K	G	V	H	H	V	T	V	S	Y	N	Y	V	Y
Template Known Secondary structure							S											T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T		S	S		B	S					T	T								S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.																			.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions