Job Description P46130 Confidence 98.47% Date Thu Jan 5 12:04:05 GMT 2012 Rank 11 Aligned Residues 242 % Identity 13% Template c1czfB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:polygalacturonase ii; PDBTitle: endo-polygalacturonase ii from aspergillus niger Resolution 1.68 Å

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		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	T	Q	G	V	T	H	T	T	I	Q	A	A	V	D	A	A	I	I	K	R	T	N	K	R	Q	Y	I	A	V	M	P	G	E	Y	Q	G	T	V	Y	V	P	A	A	P	G	G	I	T	L	Y	G	T	G	E	K	P	I	D	V	K	I	G	L	S	L	D	G	G	M	S	P	A	D	W	R	H	D	V
Query Conservation
Alig confidence																										.	.	.										.	.	.																	.	.	.	.
Template Conservation																										.	.	.										.	.	.																	.	.	.	.
Template Sequence		D	S	C	T	F	T	T	A	A	A	A	K	A	G	K	A	K	C	S	T	I	T	L	N	.	.	.	N	I	E	V	P	A	G	T	T	.	.	.	L	D	L	T	G	L	T	S	G	T	K	V	I	F	E	G	.	.	.	.	T	T	T	F	Q	Y	E	E	W	A	G	P	L	I	S	M	S	G	E	H	I
Template Known Secondary structure							S	S								G	G	G		S						.	.	.	S					T	T			.	.	.					S			T	T							S	.	.	.	.									S				S							S
Template Predicted Secondary structure																										.	.	.										.	.	.																	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.				.	.	.	.	.	.	.	.	60				.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.					.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	R	G	K	Y	M	P	G	K	P	A	W	Y	M	Y	D	S	C	Q	S	K	R	S	D	S	I	G	V	L	C	S	A	V	F	W	S	Q	N	N	G	L	Q	L	Q	N	L	T	I	E	N	T	L	G	D	S	V	D	A	G	N	H	P	A	V	A	L	R	T	D	G	D	Q	V	Q	I	N	N	V	N
Query Conservation
Alig confidence									.	.																																												.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.																																												.	.	.	.	.	.	.	.	.	.
Template Sequence		T	V	T	G	A	S	G	.	.	H	L	I	N	C	D	G	A	R	W	W	D	G	K	G	T	S	G	K	K	K	P	K	F	F	Y	A	H	G	L	D	S	S	S	I	T	G	L	N	I	K	N	T	.	.	.	.	.	.	.	.	.	.	P	L	M	A	F	S	V	Q	A	N	D	I	T	F	T	D	V	T
Template Known Secondary structure							T	T	.	.							G	G	G	T			S		T	T	S	S	S													T					S							.	.	.	.	.	.	.	.	.	.	S	S		S												S
Template Predicted Secondary structure									.	.																																												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.											.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		247	.	.										250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.			.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.																																								.	.
Query SS confidence					.	.	.	.	.	.	.	.	.																																								.	.
Query Sequence		I	L	G	.	.	.	.	.	.	.	.	.	R	Q	N	T	F	F	V	T	N	S	G	V	Q	N	R	L	E	T	N	R	Q	P	R	T	L	V	T	N	S	Y	I	E	G	D	V	D	I	V	S	.	.	G	R	G	A	V	V	F	D	N	T	E	F	R	V	V	N	S	R	T	Q	Q	E	A	Y	V	F	A
Query Conservation					.	.	.	.	.	.	.	.	.																																								.	.
Alig confidence					.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.																						.	.														.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.
Template Sequence		I	N	N	A	D	G	D	T	Q	G	G	H	N	T	D	A	F	D	V	.	.	.	.	.	.	.	.	.	.	.	G	N	S	V	G	V	N	I	I	K	P	W	V	H	N	Q	D	D	C	L	A	V	N	S	G	E	N	I	W	F	T	G	G	T	C	I	.	.	.	.	G	G	H	G	L	S	I	G	S	V
Template Known Secondary structure					G	G	G	G	T	T	T			S			S				.	.	.	.	.	.	.	.	.	.	.		S								S						S	S		S				S	S								S					.	.	.	.	S	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.												.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220					.	.	.	.	.	.	.	.	.	230
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	T	L	S	N	I	Y	Y	G	F	L	A	V	N	S	R	F	N	A	F	G	D	G	V	A	Q	L	G	R	S	L	D	V	D	A	N	T	N	G	Q	V	V	I	R	D	S	A	I	N	E	G
Query Conservation
Alig confidence																					.	.
Template Conservation																					.	.
Template Sequence		G	D	R	S	N	N	V	V	K	N	V	T	I	E	H	S	T	V	S	.	.	N	S	E	N	A	V	R	I	K	T	I	S	G	A	T	G	S	V	S	E	I	T	Y	S	N	I	V	M	S	G	I
Template Known Secondary structure		S	S	S	S																.	.	S		S									T	T
Template Predicted Secondary structure																					.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.			250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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