Job Description P76162 Confidence 23.24% Date Thu Jan 5 12:19:57 GMT 2012 Rank 25 Aligned Residues 33 % Identity 36% Template c2zkqn_ PDB info PDB header:ribosomal protein/rna Chain: N: PDB Molecule: PDBTitle: structure of a mammalian ribosomal 40s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	P	C	A	C	C	G	M	P	A	D	D	P	H	H	L	I	G	H	G	Q	G	G	M	G	T	K	A	H	D	L	F	V	L	P	L	C	R	K	H	H	N	E	L	H	T	D	T
Query Conservation
Alig confidence												.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	R	S	C	R	V	C	S	N	R	.	.	.	.	H	G	L	I	R	K	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	L	N	M	C	R	Q	C	F	R	Q	Y	A	K	D	I
Template Known Secondary structure						S	S	S			S	.	.	.	.	T	T			T	T	T		.	.	.	.	.	.	.	.	.	.	.	.			S								T	T	T	T	S
Template Predicted Secondary structure												.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.					.	.	30	.	.	.	.	.													.	.	.	.	40	.	.	.	.	.	.	.	.	.	50

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions