Job Description P0ABQ4 Confidence 99.56% Date Thu Jan 5 11:16:05 GMT 2012 Rank 30 Aligned Residues 151 % Identity 18% Template c3ky8B_ PDB info PDB header:biosynthetic protein Chain: B: PDB Molecule:putative riboflavin biosynthesis protein; PDBTitle: crystal structure of putative riboflavin biosynthesis protein2 (yp_001092907.1) from shewanella sp. pv-4 at 2.12 a resolution Resolution 2.12 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.						.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50					.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure															.								.	.	.	.	.																.														.	.	.	.
Query SS confidence															.								.	.	.	.	.																.														.	.	.	.
Query Sequence		S	L	I	A	A	L	A	V	D	R	V	I	G	.	M	E	N	A	M	P	W	.	.	.	.	.	N	L	P	A	D	L	A	W	F	K	R	N	T	L	N	.	K	P	V	I	M	G	R	H	T	W	E	S	I	.	.	.	.	G	R	P	L	P	G	R	K	N	I	I	L	S	S	Q	P	G	T	D	D	R
Query Conservation															.								.	.	.	.	.																.														.	.	.	.
Alig confidence															.								.	.	.	.	.																.														.	.	.	.
Template Conservation
Template Sequence		I	V	F	I	A	T	S	L	D	G	Y	I	A	D	K	R	G	K	L	D	W	L	H	S	V	P	N	P	N	N	V	D	T	G	F	V	A	L	X	E	R	V	D	G	L	V	X	G	R	N	T	L	D	X	V	L	S	F	D	C	D	W	P	Y	S	K	P	V	F	V	L	S	N	T	X	T	E	V	P	Q
Template Known Secondary structure									T	T	S					T	T	S			G	G	G	G	G	S			T	T				S	S									S															T		S					S	S							S	S			S			T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
								72	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140
Predicted Secondary structure		.	.	.	.	.	.																.																			.	.																.													.
Query SS confidence		.	.	.	.	.	.																.																			.	.																.													.
Query Sequence		.	.	.	.	.	.	V	T	W	V	K	S	V	D	E	A	I	A	A	C	G	.	D	V	P	E	I	M	V	I	G	G	G	R	V	Y	E	Q	F	L	.	.	P	K	A	Q	K	L	Y	L	T	H	I	D	A	E	V	.	E	G	D	T	H	F	P	D	Y	E	P	D	.	D	W	E	S	V	F	S	E	F
Query Conservation		.	.	.	.	.	.																.																			.	.																.													.
Alig confidence		.	.	.	.	.	.																.																			.	.																.													.
Template Conservation
Template Sequence		G	Y	E	D	K	V	F	L	V	K	G	K	L	V	D	I	I	A	D	L	N	A	K	G	F	N	E	L	Y	I	D	G	G	V	T	I	Q	N	F	L	K	E	D	L	I	D	E	X	V	I	T	R	F	P	I	L	L	G	G	G	V	P	L	F	G	E	L	E	S	S	L	S	F	N	V	I	K	S	E	V
Template Known Secondary structure		T		T	T	T						S												T	T								S										T	T											S				S	S	S			S					S	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	D	A	D	A	Q	N	S	H	S	Y	C	F	E	I	L	E	R	R
Query Conservation
Alig confidence					.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.
Template Sequence		V	L	D	.	.	.	.	.	.	S	L	T	Q	T	T	Y	H	R	K
Template Known Secondary structure			T	T	.	.	.	.	.	.	T
Template Predicted Secondary structure					.	.	.	.	.	.
Template SS confidence
		164	.	.							.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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