Job Description P0ABQ4 Confidence 99.85% Date Thu Jan 5 11:16:05 GMT 2012 Rank 27 Aligned Residues 150 % Identity 19% Template c3jtwB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:dihydrofolate reductase; PDBTitle: crystal structure of putative dihydrofolate reductase (yp_805003.1)2 from pediococcus pentosaceus atcc 25745 at 1.90 a resolution Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.						.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.				.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure															.									.	.	.	.	.																.															.	.	.
Query SS confidence															.									.	.	.	.	.																.															.	.	.
Query Sequence		I	S	L	I	A	A	L	A	V	D	R	V	I	.	G	M	E	N	A	M	P	W	.	.	.	.	.	N	L	P	A	D	L	A	W	F	K	R	N	T	L	N	.	K	P	V	I	M	G	R	H	T	W	E	S	I	G	.	.	.	R	P	L	P	G	R	K	N	I	I	L	S	S	Q	P	G	T	D	D	R
Query Conservation															.									.	.	.	.	.																.															.	.	.
Alig confidence															.									.	.	.	.	.																.															.	.	.
Template Conservation
Template Sequence		V	I	L	F	I	A	X	S	I	D	N	Y	I	A	D	D	Q	G	A	V	D	W	L	E	K	N	V	H	G	T	E	S	D	D	S	Y	E	K	X	Y	S	K	I	D	T	V	I	X	G	R	T	T	Y	E	Q	V	T	Q	K	K	Y	V	Y	A	D	R	Q	T	Y	I	V	T	S	H	L	G	E	D	T	D
Template Known Secondary structure										T	T						T	T	S								T																															T	T				T	T	T	T	S							S	S						S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
				72	.	.	.	.	.	.	.	80	.	.	.	.	.	.			.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.			.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure		.	.																.	.																				.	.															.													.
Query SS confidence		.	.																.	.																				.	.															.													.
Query Sequence		.	.	V	T	W	V	K	S	V	D	E	A	I	A	A	C	G	.	.	D	V	P	E	I	M	V	I	G	G	G	R	V	Y	E	Q	F	L	P	.	.	K	A	Q	K	L	Y	L	T	H	I	D	A	E	V	.	E	G	D	T	H	F	P	D	Y	E	P	D	.	D	W	E	S	V	F	S	E	F	H	D	A
Query Conservation		.	.																.	.																				.	.															.													.
Alig confidence		.	.																.	.																				.	.															.													.
Template Conservation
Template Sequence		K	I	K	Y	W	K	Q	S	P	V	E	L	V	K	R	I	Q	K	E	K	G	K	D	V	W	I	V	G	G	A	K	I	I	D	P	L	V	Q	A	N	L	I	D	T	Y	I	L	T	T	V	P	I	F	L	G	S	G	I	R	L	F	D	R	L	E	E	Q	V	P	V	R	L	I	D	V	Y	Q	K	N	E
Template Known Secondary structure		S						S										T	T	S	S	S																		T	T			S								S					S	S			S	S	S			S	S													T	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	Q	N	S	H	S	Y	C	F	E	I	L	E	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	L	V	Y	S	I	Y	Q	R
Template Known Secondary structure		.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									169	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions