Job Description P0ABQ4 Confidence 100.00% Date Thu Jan 5 11:16:05 GMT 2012 Rank 23 Aligned Residues 147 % Identity 37% Template c3clbA_ PDB info PDB header:oxidoreductase, transferase Chain: A: PDB Molecule:dhfr-ts; PDBTitle: structure of bifunctional tcdhfr-ts in complex with tmq Resolution 3.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.														.	.	40	.	.	.	.	.	.	.	.	.	50	.				.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Query Sequence		I	S	L	I	A	A	L	A	V	D	R	V	I	G	M	E	N	A	M	P	W	N	L	P	A	D	L	A	W	F	K	R	N	T	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	K	P	V	I	M	G	R	H	T	W	E	S	I	G	.	.	.	R	P	L	P	G	R	K	N	I	I	L	S	S	Q
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template Conservation
Template Sequence		F	S	L	V	V	A	V	D	E	R	G	G	I	G	D	G	R	S	I	P	W	N	V	P	E	D	M	K	F	F	R	D	V	T	T	K	L	R	G	K	N	V	K	P	S	P	A	K	R	N	A	V	V	M	G	R	K	T	W	D	S	I	P	P	K	F	R	P	L	P	G	R	L	N	V	V	L	S	S	T
Template Known Secondary structure										T	T					S	S	S	S		S																		S	S	S	S				B	T	T	B														S		G	G	G		S		T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		66	.													.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.							.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.						.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.																		.	.	.	.	.														.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.																		.	.	.	.	.														.
Query Sequence		P	G	.	.	.	.	.	.	.	.	.	.	.	.	T	D	D	R	V	T	W	V	K	S	V	D	E	A	I	A	A	C	G	D	V	.	.	.	.	.	.	P	E	I	M	V	I	G	G	G	R	V	Y	E	Q	F	L	P	.	.	.	.	.	K	A	Q	K	L	Y	L	T	H	I	D	A	E	.	V	E	G
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.																		.	.	.	.	.														.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.																		.	.	.	.	.														.
Template Conservation
Template Sequence		L	T	T	Q	H	L	L	D	G	L	P	D	E	H	A	D	S	I	V	A	V	N	G	G	L	E	Q	A	L	Q	L	L	A	S	P	N	Y	T	P	S	I	E	T	V	Y	C	I	G	G	G	S	V	Y	A	E	A	L	R	P	P	C	V	H	L	L	Q	A	I	Y	R	T	T	I	R	A	S	E	S	S	C
Template Known Secondary structure								S	S	S	S	S											S	S									T	T	S	T	T	T	T	T	T																	T	S	T	T	G	G	G	G														T	T
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	H	F	P	D	Y	E	P	D	D	W	E	S	V	F	S	E	F	H	D	A	D	A	Q	N	S	H	S	Y	C	F	E	I	L	E	R	R
Query Conservation
Alig confidence							.				.	.	.	.	.	.	.	.	.	.
Template Conservation							.				.	.	.	.	.	.	.	.	.	.
Template Sequence		S	V	F	F	R	.	V	P	E	.	.	.	.	.	.	.	.	.	.	S	G	T	E	A	A	A	G	I	E	W	Q	R	E	T	I	S	E	E
Template Known Secondary structure							.				.	.	.	.	.	.	.	.	.	.	T	T	S	T	T	T	T	T
Template Predicted Secondary structure							.				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		188	.	190	.	.		.	.	.											.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions