Job Description P0ABQ4 Confidence 98.79% Date Thu Jan 5 11:16:05 GMT 2012 Rank 38 Aligned Residues 151 % Identity 17% Template c2p4gA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of a pyrimidine reductase-like protein (dip1392)2 from corynebacterium diphtheriae nctc at 2.30 a resolution Resolution 2.30 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.																		.	.	60	.	.
Predicted Secondary structure																							.													.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.													.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	S	L	I	A	A	L	A	V	D	R	V	I	G	M	E	N	A	M	P	W	.	N	L	P	A	D	L	A	W	F	K	R	N	.	T	L	N	K	P	V	I	M	G	R	H	T	W	E	S	I	G	R	P	L	P	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	N	I	I	L
Query Conservation																							.													.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.													.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	R	A	I	A	I	T	S	I	N	G	S	A	T	L	S	G	V	S	G	P	X	G	D	Q	T	D	A	D	L	L	I	Q	L	R	G	W	A	D	A	I	V	V	G	A	E	T	A	R	K	E	N	Y	G	P	V	V	L	P	H	G	I	K	N	Q	R	Q	K	L	G	R	C	G	L	P	K	L	T	L	L
Template Known Secondary structure										T	T	S	B	S		B	T	T	B	S	G	G	G																	S												T	T			S														T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		63	.	.	.	.	.	.	70	.	.	.	.	.	.																																														.	.	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Query Sequence		S	S	Q	P	G	T	D	D	R	V	T	W	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	D	E	A	I	A	A	C	G	D	.	.	V	P	E	I	M	V	I	G
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation
Template Sequence		S	K	S	L	Y	F	D	F	S	S	E	L	F	S	P	D	L	P	S	E	L	S	P	L	V	I	T	Q	Q	P	A	N	N	S	E	Q	W	D	Q	R	L	Q	K	L	I	D	V	G	V	E	V	I	V	A	P	T	S	T	N	P	L	K	I	A	F	D	A	L	H	A	R	R	L	K	K	I	S	I	E	G
Template Known Secondary structure			S	S					T	T	S	G	G	G		T	T	S		G	G	G	S									S	S																T								S	S	S												T	T	T
Template Predicted Secondary structure
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		96	.	.	.	100	.	.	.	.	.			.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.							.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.																		.	.	.	.	.	.
Query SS confidence												.	.																		.	.	.	.	.	.
Query Sequence		G	G	R	V	Y	E	Q	F	L	P	.	.	K	A	Q	K	L	Y	L	T	H	I	D	A	E	V	E	G	D	.	.	.	.	.	.	T	H	F	P	D	Y	E	P	D	D	W	E	S	V	F	S	E	F	H	D	A	D	A	Q	N	S	H	S	Y	C	F	E	I	L	E	R
Query Conservation												.	.																		.	.	.	.	.	.
Alig confidence												.	.																		.	.	.	.	.	.																								.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.
Template Sequence		G	P	S	V	Y	R	Q	A	L	S	L	G	I	V	D	R	L	H	L	T	I	A	P	N	I	I	C	P	V	E	S	P	L	F	G	K	I	S	D	D	S	F	T	T	R	L	V	L	E	X	L	S	S	S	P	N	G	L	.	.	.	.	.	.	I	F	S	R	Y	K	V
Template Known Secondary structure													T											S				S	S		S	S	B	T	T		S		T	T	S															T	T			.	.	.	.	.	.
Template Predicted Secondary structure																																																												.	.	.	.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.							.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions