Job Description P0ABQ4 Confidence 99.23% Date Thu Jan 5 11:16:05 GMT 2012 Rank 37 Aligned Residues 143 % Identity 16% Template c2d5nB_ PDB info PDB header:hydrolase, oxidoreductase Chain: B: PDB Molecule:riboflavin biosynthesis protein ribd; PDBTitle: crystal structure of a bifunctional deaminase and reductase2 involved in riboflavin biosynthesis Resolution 2.97 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.									50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure																.								.														.															.	.	.	.	.	.	.	.																	.	.	.	.	.
Query SS confidence																.								.														.															.	.	.	.	.	.	.	.																	.	.	.	.	.
Query Sequence		I	S	L	I	A	A	L	A	V	D	R	V	I	G	.	M	E	N	A	M	P	W	.	N	L	P	A	D	L	A	W	F	K	R	N	T	.	L	N	K	P	V	I	M	G	R	H	T	W	E	S	.	.	.	.	.	.	.	.	I	G	R	P	L	P	G	R	K	N	I	I	L	S	S	Q	.	.	.	.	.
Query Conservation																.								.														.															.	.	.	.	.	.	.	.																	.	.	.	.	.
Alig confidence																.								.														.															.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Conservation
Template Sequence		V	T	L	K	A	A	A	S	L	D	G	K	I	A	T	S	T	G	D	S	K	W	I	T	S	E	A	A	R	Q	D	A	Q	Q	Y	R	K	T	H	Q	S	I	L	V	G	V	G	T	V	K	A	D	N	P	S	L	T	C	R	L	P	N	V	T	K	Q	P	V	R	V	I	L	D	T	V	L	S	I	P	E
Template Known Secondary structure										T	T	S	B	S	S		T	T				S		S	S															S	S										T	T	T								S	S				S									S	S					T
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
								66	.	.	.	70	.	.	.	.	.	.																											.	.	.	80	.	.	.	.	.	.			.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.																			.	.
Query SS confidence		.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.																			.	.
Query Sequence		.	.	.	.	.	.	P	G	T	D	D	R	V	T	W	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	D	E	A	I	A	A	C	G	.	.	D	V	P	E	I	M	V	I	G	G	G	R	V	Y	E	Q	F	L	.	.	P	K	A	Q	K
Query Conservation		.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.																			.	.
Alig confidence		.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.																			.	.
Template Conservation
Template Sequence		D	A	K	V	I	C	D	Q	I	A	P	T	W	I	F	T	T	A	R	A	D	E	E	K	K	K	R	L	S	A	F	G	V	N	I	F	T	L	E	T	E	R	I	Q	I	P	D	V	L	K	I	L	A	E	E	G	I	M	S	V	Y	V	E	G	G	S	A	V	H	G	S	F	V	K	E	G	C	F	Q	E
Template Known Secondary structure		T	S	T	T	T	S	S		S	S								T	T	S									T	T	T	T							S	S	S	S													T	T																				T			S
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120									.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.												.
Query SS confidence													.	.	.	.	.	.	.	.												.
Query Sequence		L	Y	L	T	H	I	D	A	E	V	E	.	.	.	.	.	.	.	.	G	D	T	H	F	P	D	Y	E	P	D	.	D	W	E	S	V	F	S	E	F	H	D	A	D
Query Conservation													.	.	.	.	.	.	.	.												.
Alig confidence													.	.	.	.	.	.	.	.												.
Template Conservation
Template Sequence		I	I	F	Y	F	A	P	K	L	I	G	G	T	H	A	P	S	L	I	S	G	E	G	F	Q	S	M	K	D	V	P	L	L	Q	F	T	D	I	T	Q	I	G	R	D
Template Known Secondary structure								S						T	T	S		B	S	S		S	S			S	S	G	G	G	S												T	T
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions