 |
Job Description | P0ABQ4 | Confidence | 15.15% | Date | Thu Jan 5 11:16:05 GMT 2012 |
Rank | 55 | Aligned Residues | 67 |
% Identity | 16% | Template | c1jb9A_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:ferredoxin-nadp reductase; |
PDBTitle: crystal structure of the ferredoxin:nadp+ reductase from maize root at2 1.7 angstroms
|
Resolution | 1.70 Å |
|
 |
  |   |
39 | 40 | . | . | . | . | . | . | . | . | . | 50 | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | |
|
. | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  | . | . |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | V | I | M | G | R | H | T | W | E | S | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | R | P | L | P | G | R | K | N | I | I | L | S | S | Q | P | G | T | D | D | R | V | T | . |
. |
W | V | K | S | V | D | E | A | I | A | A | C | G | D | V | P | E | I | M | V | I | G | G | G | R | V | Y | E | Q | F | L | P |
Query Conservation |   |
  |
|
|
|
|
|
|
|   |
|
|
| . | . | . | . | . | . | . | . | . | . | . |   |   |
|
|   |   |
|   |   |
|
|
|
|
|   |   |   |   |   |   |   |   |   | . | . |
|   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |   |
|
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|   |
|   |   |   |
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|
|
|
|   |   |   |
|   |   |   |
|   |   |
Template Sequence |   |
W | L | F | L | G | V | A | N | S | D | S | L | L | Y | D | E | E | F | T | S | Y | L | K | Q | Y | P | D | N | F | R | Y | D | K | A | L | S | R | E | Q | K | G | K | M | Y | V | Q | D | K | I | E | E | Y | S | D | E | I | F | K | L | L | D | G | G | A | H | I | Y | F | C | G | L | K | G | M | M | P | G | I | Q | D |
Template Known Secondary structure |   |
 |  |  |  |  |  | S | S | G | G | G |
| S | S |  |  |  |  |  |  |  |  |  |  |
| T | T | T |  |  |  |  |  |  |  | T | T | T |
|
|
|
|
|
|  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
| G | G | G |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
202 | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|