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Job DescriptionP0AG07
Confidence99.24%DateThu Jan 5 11:27:45 GMT 2012
Rank83Aligned Residues171
% Identity12%Templated2q8za1
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel Decarboxylase
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MVLKSLRNYGITAPID. . VHLMVKPVDRIVPDFAA. AGASIITFHPEASEHVDRTLQLIKENGCKAGLVFNPATP. . . . .
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Template Sequence  NVFDYLYELNIPTILDMKINDIGNTVKNYRKFIFEYLKSDSCTVNIYMGTNMLKDICYDEEKNKYYSAFVLVKTTNPDSA
Template Known Secondary structure  T




TTS

S

TT
SGGGGGTSTTTT


STTT
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   121........130.........140.........150.........160.........170.........180.........190.........200
 
   123......130.........140.........150.........160.........170.........180.....
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Query Sequence  . . . . . . . . . . . . . . . . . LSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGFDIRLEVDGGVKVNNI
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Template Sequence  IFQKNLSLDNKQAYVIMAQEALNMSSYLN. . . . LEQNNEFIGFVVGANSYDEMNYIRTYFPNCYILSPGIGAQNGDLHKT
Template Known Secondary structure  TT
TTTT....TGGGT


TT
STT



SSTT


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   201........210.........220......... 230.........240.........250.........260.........270......
 
   186... 190.........200.........210.........220.....
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Query Sequence  GEIA. . . AAGADMFVAGSAIFDQPDYKKVIDEMRSELAKVSHE
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Template Sequence  LTNGYHKSYEKILINIGRAITKNPYPQKAAQMYYDQINAILKQ
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SSGGG
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   277..280.........290.........300.........310.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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