Job Description P0AG07 Confidence 98.03% Date Thu Jan 5 11:27:45 GMT 2012 Rank 171 Aligned Residues 135 % Identity 19% Template d2btma_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 2.40

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		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.									.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.													.	.	.	.	130	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Query Sequence		V	P	D	F	A	A	A	G	A	S	I	I	T	F	H	.	.	.	.	.	.	.	.	P	E	A	S	E	H	V	D	R	T	L	Q	L	I	K	E	N	G	C	K	A	G	L	V	F	N	P	A	T	P	L	S	Y	.	.	.	.	.	.	.	.	.	.	.	.	L	D	Y	V	M	D	K	L	D	.	.	.
Query Conservation																	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Alig confidence																	.	.	.	.	.	.	.	.																										.								.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Template Conservation																																																		.
Template Sequence		P	V	M	L	K	D	L	G	V	T	Y	V	I	L	G	H	S	E	R	R	Q	M	F	A	E	T	D	E	T	V	N	K	K	V	L	A	A	F	T	R	G	L	I	P	I	I	C	C	.	G	E	S	L	E	E	R	E	A	G	Q	T	N	A	V	V	A	S	Q	V	E	K	A	L	A	G	L	T	P	E	Q
Template Known Secondary structure									T							S								S																		T								.									T	T															T	T
Template Predicted Secondary structure																																																		.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
						135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.							.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure		.	.	.	.																																.	.	.	.	.	.																											.
Query SS confidence		.	.	.	.																																.	.	.	.	.	.																											.
Query Sequence		.	.	.	.	V	I	L	L	M	S	V	N	P	G	F	G	G	Q	S	F	I	P	Q	T	L	D	K	L	R	E	V	R	R	R	I	.	.	.	.	.	.	D	E	S	G	F	D	I	R	L	E	V	D	G	G	V	K	V	N	N	I	G	E	I	A	A	A	.	G	A	D	M	F	V	A	G	S	A	I	F
Query Conservation		.	.	.	.																																.	.	.	.	.	.																											.
Alig confidence		.	.	.	.																																.	.	.	.	.	.																											.
Template Conservation
Template Sequence		V	K	Q	A	V	I	A	Y	E	P	I	W	A	I	G	T	G	K	S	S	T	P	E	D	A	N	S	V	C	G	H	I	R	S	V	V	S	R	L	F	G	P	E	A	A	E	A	I	R	I	Q	Y	G	G	S	V	K	P	D	N	I	R	D	F	L	A	Q	Q	Q	I	D	G	A	L	V	G	G	A	S	L
Template Known Secondary structure			T	T								G	G	G	T	T	T	S																													T	T	S						S	S			T	T	T						T	S	T	T							S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Q	P	D	Y	K	K	V	I	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	P	A	S	F	L	Q	L	V	E
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions