Job Description P0AG07 Confidence 59.55% Date Thu Jan 5 11:27:45 GMT 2012 Rank 473 Aligned Residues 168 % Identity 16% Template d1vfsa2 SCOP info TIM beta/alpha-barrel PLP-binding barrel Alanine racemase-like, N-terminal domain Resolution 1.90

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	E	D	T	A	K	A	L	A	A	G	A	D	V	V	H	F	D	V	M	D	N	H	Y	V	P	N	L	T	I	G	P	M	V	L	K	S	L	R	N	Y	G	I	T	A	P	I	D	V	H	L	M	V	K	P	V	D	R	I	V	P	D	F	A	A	A	G	A	S	I	I	T	F	H	P	E	A	S	E
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.																												.	.									.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.																												.	.									.	.	.
Template Sequence		A	V	P	C	A	R	A	A	Q	E	A	G	A	A	W	L	G	T	A	.	.	.	.	.	.	.	.	.	.	.	.	T	P	E	E	A	L	E	L	R	A	A	G	I	Q	G	R	I	M	C	W	L	W	T	P	G	G	P	.	.	W	R	E	A	I	E	T	D	.	.	.	I	D	V	S	V	S	G	M	W
Template Known Secondary structure													T							S	.	.	.	.	.	.	.	.	.	.	.	.	S										T	T			S									T	T			.	.							T	T	.	.	.							S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.																												.	.									.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.													.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.				100	.	.	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.																.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Query Sequence		H	V	D	R	T	L	Q	L	I	K	E	N	G	C	K	A	G	L	V	F	N	P	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	S	Y	L	D	Y	V	M	D	K	L	D	V	I	L	L	M	S	V	N	P	G	F	G	.	.	G	Q	S	F	I	P	Q	T	L	D	K	L	R	E
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Conservation
Template Sequence		A	L	D	E	V	R	A	A	A	R	A	A	G	R	T	A	R	I	Q	L	A	D	T	G	L	G	R	N	G	C	Q	P	A	D	W	A	E	L	V	G	A	A	V	A	A	Q	A	E	G	T	V	Q	V	T	G	V	W	S	H	F	A	C	A	D	E	P	G	H	P	S	I	R	L	Q	L	D	A	F	R	D
Template Known Secondary structure														T	S									S	S			S	S	S																			T	T	S											S	S	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	R	R	I	D	E	S	G	F	D	I	R	L	E	V	D	G	G	V	K	V	N	N	I	G	E	I	A	A	A	G	A	D	M	F	V	A	G	S	A	I	F	D
Query Conservation
Alig confidence																						.	.
Template Conservation																						.	.
Template Sequence		M	L	A	Y	A	E	K	E	G	V	D	P	E	V	R	H	I	A	N	S	.	.	P	A	T	L	T	L	P	E	T	H	F	D	L	V	R	T	G	L	A	V	Y	G
Template Known Secondary structure									T	T				S								.	.							G	G	G		S	S						G	G	G	G	T
Template Predicted Secondary structure																						.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.			210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions