Job Description P0AG07 Confidence 99.85% Date Thu Jan 5 11:27:45 GMT 2012 Rank 34 Aligned Residues 198 % Identity 19% Template d1ujpa_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 1.34

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		2	.	.	.	.	.	.	.	10	.	.	.			.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50																					.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	Q	Y	L	I	A	P	S	I	L	S	A	.	.	D	F	A	R	L	G	E	D	T	A	K	A	L	A	A	G	A	D	V	V	H	F	D	V	M	D	N	H	Y	V	P	N	L	T	I	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	V	L	K	S	L	R	N	Y
Query Conservation														.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.															.										.	.	.				.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.										.	.	.				.	.	.	.
Template Sequence		G	R	A	A	L	I	P	Y	L	T	A	G	F	P	S	R	E	G	F	L	Q	A	V	E	E	V	L	P	.	Y	A	D	L	L	E	I	G	L	.	.	.	P	Y	S	.	.	.	.	D	G	P	V	I	Q	R	A	S	E	L	A	L	R	K	G	M	S	V	Q	G	A	L	E	L	V	R	E	V	R	A	L
Template Known Secondary structure		T	B									T	T	S	S													G	G	.	G		S	S						.	.	.				.	.	.	.															T	T
Template Predicted Secondary structure																														.										.	.	.				.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50				.	.	.					.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.						.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.
Query SS confidence																	.	.	.	.	.
Query Sequence		G	I	T	A	P	I	D	V	H	L	M	V	K	P	V	.	.	.	.	.	D	R	I	V	P	D	F	A	A	A	G	A	S	I	I	T	F	H	P	E	A	S	E	H	V	D	R	T	L	Q	L	I	K	E	N	G	C	K	A	G	L	V	F	N	P	A	T	P	L	S	Y	L	D	Y	V	M	D	K	L	D
Query Conservation																	.	.	.	.	.
Alig confidence		.															.	.	.	.	.
Template Conservation		.
Template Sequence		.	T	E	K	P	L	F	L	M	T	Y	L	N	P	V	L	A	W	G	P	E	R	F	F	G	L	F	K	Q	A	G	A	T	G	V	I	L	P	D	L	P	P	D	E	D	P	G	L	V	R	L	A	Q	E	I	G	L	E	T	V	F	L	L	A	P	T	S	T	D	A	R	I	A	T	V	V	R	H	A	T
Template Known Secondary structure		.			S																											T							T	T			G	G	G												T									T	T											T	T
Template Predicted Secondary structure		.
Template SS confidence
			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.					.	.	.	.	.	.	210
Predicted Secondary structure																																																																							.	.	.	.
Query SS confidence																																																																							.	.	.	.
Query Sequence		V	I	L	L	M	S	V	N	P	G	F	G	G	Q	S	F	I	P	Q	T	L	D	K	L	R	E	V	R	R	R	I	D	E	S	G	F	D	I	R	L	E	V	D	G	G	V	K	V	N	N	I	G	E	I	A	A	A	G	A	D	M	F	V	A	G	S	A	I	F	.	.	.	.	D	Q	P	D	Y	K	K
Query Conservation																																																																							.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.														.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.
Template Sequence		G	F	V	Y	A	V	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	K	D	L	V	R	R	I	K	A	R	T	A	L	P	V	A	V	G	F	G	V	S	G	K	A	T	A	A	Q	A	.	.	A	V	A	D	G	V	V	V	G	S	A	L	V	R	A	L	E	E	G	R	S	L	A	P
Template Known Secondary structure		S								.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T			S						S				S								.	.	T	T	S	S														T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.
Template SS confidence
		169	170	.	.	.	.	.	.															.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	D	E	M	R	S	E	L	A	K	V	S	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	Q	E	I	R	Q	G	L	Q	R	L	P	L
Template Known Secondary structure											B
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions