Job Description P0AG07 Confidence 97.75% Date Thu Jan 5 11:27:45 GMT 2012 Rank 200 Aligned Residues 160 % Identity 18% Template d1ttja_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 2.40

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.									.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.
Query Sequence		V	L	K	S	L	R	N	Y	G	I	T	A	P	I	D	V	H	L	M	V	K	P	V	D	R	I	V	P	D	F	A	A	A	G	A	S	I	I	T	F	H	.	.	.	.	.	.	.	.	P	E	A	S	E	H	V	D	R	T	L	Q	L	I	K	E	N	G	C	K	A	G	L	V	F	N	P	A	T	P	L
Query Conservation																																											.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.																										.
Template Conservation																																																																												.
Template Sequence		H	L	A	M	T	K	E	R	L	S	H	P	K	F	V	I	A	A	Q	N	A	G	N	A	D	A	L	A	S	L	K	D	F	G	V	N	W	I	V	L	G	H	S	E	R	R	A	Y	Y	G	E	T	N	E	I	V	A	D	K	V	A	A	A	V	A	S	G	F	M	V	I	A	C	I	.	G	E	T	L	Q
Template Known Secondary structure													T	T						S				S										T	T							S								S																	T	T								.
Template Predicted Secondary structure																																																																												.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.
		124	.													.	.	.	.	130	.	.	.	.								.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.							.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.																																.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.																																.	.	.	.	.	.
Query Sequence		S	Y	.	.	.	.	.	.	.	.	.	.	.	.	L	D	Y	V	M	D	K	L	D	.	.	.	.	.	.	.	V	I	L	L	M	S	V	N	P	G	F	G	G	Q	S	F	I	P	Q	T	L	D	K	L	R	E	V	R	R	R	I	.	.	.	.	.	.	D	E	S	G	F	D	I	R	L	E	V	D	G
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.																																.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.																																.	.	.	.	.	.
Template Conservation
Template Sequence		E	R	E	S	G	R	T	A	V	V	V	L	T	Q	I	A	A	I	A	K	K	L	K	K	A	D	W	A	K	V	V	I	A	Y	E	P	V	W	A	I	G	T	G	K	V	A	T	P	Q	Q	A	Q	E	A	H	A	L	I	R	S	W	V	S	S	K	I	G	A	D	V	A	G	E	L	R	I	L	Y	G	G
Template Known Secondary structure					T	T															T	T			G	G	G	G	G	G								G	G	G	T	T	T	S																							T														S
Template Predicted Secondary structure
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		179	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		G	V	K	V	N	N	I	G	E	I	A	A	.	A	G	A	D	M	F	V	A	G	S	A	I	F	D	Q	P	D	Y	K	K	V	I	D
Query Conservation														.
Alig confidence														.																	.
Template Conservation																															.
Template Sequence		S	V	N	G	K	N	A	R	T	L	Y	Q	Q	R	D	V	N	G	F	L	V	G	G	A	S	L	K	P	E	.	F	V	D	I	I	K
Template Known Secondary structure		S			T	T	T						T	S	T	T							S	G	G	G	G	S	T		.
Template Predicted Secondary structure																															.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.		.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions