Return to main results Retrieve Phyre Job Id

Job DescriptionP0AG07
Confidence100.00%DateThu Jan 5 11:27:45 GMT 2012
Rank6Aligned Residues216
% Identity36%Templated1tqxa_
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel D-ribulose-5-phosphate 3-epimerase
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  MKQYLIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPIDVHLMVKPVDRIVPD
Query Conservation 


  
 
 
   
     
        
   


 
 

 
      
   
  
            
        
  
Alig confidence 


.











































































Template Conservation 

 .

 


 
 
   
   
      
 
 
  

 

 
      
      

           
 
      
  
Template Sequence  LKA. IIAPSVLASNISKLAEETQRMESLGAEWIHLDVMDMHFVPNLSFGPPVINNLKKYTKSIFFDVHLMVEYPEKYVPL
Template Known Secondary structure 


.BGGGS
GGGTT
SBSSSSS
B


GGG
SS
SS
GGGGGGG
Template Predicted Secondary structure 


.































Template SS confidence 















































































   4.. ...10.........20.........30.........40.........50.........60.........70.........80..
 
   81........90. ........100.........110.........120.........130.. .......140.........150......
Predicted Secondary structure 



..















..













Query SS confidence 










. .








































. .























Query Sequence  FAAAGASIITF. . HPEASEHVDRTLQLIKENGCKAGLVFNPATPLSYLDYVMDK. . LDVILLMSVNPGFGGQSFIPQTLD
Query Conservation      


 
 
..                  
    
 
   
  
        ..   
       
            
Alig confidence 










..








































..























Template Conservation     

   

                     
    
 
   
              
 
                    
Template Sequence  LKTSNQLTFHFEALNEDTERCIQLAKEIRDNNLWCGISIKPKTDVQKLVPILDTNLINTVLVMTVEPGFGGQSFMHDMMG
Template Known Secondary structure 
TTSSGGGGTT
TTT

TTS
GGGGTTT

SSS
TT
SS



GGG
Template Predicted Secondary structure 





























Template SS confidence 















































































   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   157..160.........170.........180.........190.........200.........210.........220.
Predicted Secondary structure 


















Query SS confidence 
































































Query Sequence  KLREVRRRIDESGFDIRLEVDGGVKVNNIGEIAAAGADMFVAGSAIFDQPDYKKVIDEMRSELAK
Query Conservation   
  
            
   


           


 






  
 

      
   
  
Alig confidence 







....




















































Template Conservation   
      ....     
   


           


 






    

      
   
  
Template Sequence  KVSFLRKK. . . . YKNLNIQVDGGLNIETTEISASHGANIIVAGTSIFNAEDPKYVIDTMRVSVQK
Template Known Secondary structure  ....
TT
SS

T

ST
SS
Template Predicted Secondary structure  ....
















Template SS confidence 
































































   163......170 .........180.........190.........200.........210.........220...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions