Job Description P0AG07 Confidence 97.71% Date Thu Jan 5 11:27:45 GMT 2012 Rank 203 Aligned Residues 154 % Identity 17% Template d1rbla1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.20

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																																														.	.															.	.	.	.
Query SS confidence																																																														.	.															.	.	.	.
Query Sequence		K	Q	Y	L	I	A	P	S	I	L	S	A	D	F	A	R	L	G	E	D	T	A	K	A	L	A	A	G	A	D	V	V	H	F	D	V	M	D	N	H	Y	V	P	N	L	T	I	G	P	M	V	L	K	S	L	R	N	Y	G	I	.	.	T	A	P	I	D	V	H	L	M	V	K	P	V	D	.	.	.	.
Query Conservation																																																														.	.															.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.																	.	.															.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.
Template Sequence		E	I	K	G	H	Y	L	N	V	T	A	P	T	C	E	E	M	M	K	R	A	E	F	A	K	E	L	G	M	P	I	I	M	H	D	F	.	.	.	.	.	.	.	.	L	T	A	G	F	T	A	N	T	T	L	A	K	W	C	R	D	N	G	V	L	L	H	I	H	R	A	M	H	A	V	I	D	R	Q	R
Template Known Secondary structure		S											S	S														T	T		S							.	.	.	.	.	.	.	.																			T								T	T						S		S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.									270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
									76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.							.	.	.	100	.	.	.	.	.	.	.	.																	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																						.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.																						.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	R	I	V	P	D	F	A	A	A	G	A	S	I	I	T	F	H	P	E	A	S	.	.	.	.	.	.	E	H	V	D	R	T	L	Q	L	I	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	C	K	A	G	L	V	F	N	P	A	T	P	L	S	Y	L
Query Conservation		.	.	.	.	.	.	.																						.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																						.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	H	G	I	H	F	R	V	L	A	K	C	L	R	L	S	G	G	D	H	L	H	S	G	T	V	V	G	K	L	E	G	D	K	A	S	T	L	G	F	V	D	L	M	R	E	D	H	I	E	A	D	R	S	R	G	V	F	F	T	Q	D	W	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S	S																S							S	S	S	S	S																	S					B	G	G	G	T	B		S					T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.		.	200	.	.	.	.
Predicted Secondary structure																																																																			.								.
Query SS confidence																																																																			.								.
Query Sequence		D	Y	V	M	D	K	L	D	V	I	L	L	M	S	V	N	P	G	F	G	G	Q	S	F	I	P	Q	T	L	D	K	L	R	E	V	R	R	R	I	D	E	S	G	F	D	I	R	L	E	V	D	G	G	V	K	V	N	N	I	G	E	I	A	A	A	.	G	A	D	M	F	V	A	.	G	S	A	I	F	D
Query Conservation																																																																			.								.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.								.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	M	P	G	V	L	P	V	A	S	G	G	I	H	V	W	H	M	P	A	L	V	E	I	F	G	D	D	S	V	L	Q	F	G	G	G	T	L	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T										S	S			G	G	G										S	S						S					T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																											370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
		205	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		Q	P	D	.	Y	K	K	V	I	D	E	M	R	S	E	L	A
Query Conservation					.
Alig confidence					.
Template Conservation
Template Sequence		H	P	W	G	N	A	P	G	A	T	A	N	R	V	A	L	E
Template Known Secondary structure		S	T	T
Template Predicted Secondary structure
Template SS confidence
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions