Job Description P0AG07 Confidence 97.97% Date Thu Jan 5 11:27:45 GMT 2012 Rank 175 Aligned Residues 179 % Identity 17% Template d1piia1 SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 2.00

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		G	E	D	T	A	K	A	L	A	A	G	A	D	V	V	H	F	D	V	M	D	N	H	Y	V	P	N	L	.	.	T	I	G	P	M	V	L	K	S	L	R	N	Y	G	I	T	A	P	I	D	V	H	L	M	V	K	P	V	D	R	I	V	P	D	F	A	A	A	G	A	S	I	I	T	F	H	P	E	A	S
Query Conservation																														.	.
Alig confidence																			.	.	.	.	.							.	.																.
Template Conservation																			.	.	.	.	.																								.
Template Sequence		G	Q	D	A	K	A	A	Y	D	A	G	A	I	Y	G	G	L	.	.	.	.	.	I	F	V	A	T	S	P	R	C	V	N	V	E	Q	A	Q	E	V	M	A	A	A	P	.	L	Q	Y	V	G	V	F	R	N	H	D	I	A	D	V	V	D	K	A	K	V	L	S	L	A	A	V	Q	L	H	G	N	E	E
Template Known Secondary structure												T		S					.	.	.	.	.				T	T		T	T	B															.								S	S														T		S						S
Template Predicted Secondary structure																			.	.	.	.	.																								.
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.						.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	V	D	R	T	L	Q	L	I	K	E	N	G	C	K	A	G	L	V	F	N	P	A	T	P	L	S	Y	L	D	Y	V	M	D	K	L	D	V	I	L	L	M	S	V	N	P	G	F	G	G	Q	S	F	I	P	Q	T	L	D	K	L	R	E	V	R	R	R	I	D	E	S	G	F	D	I	R	L	E	V
Query Conservation
Alig confidence																															.	.														.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.														.																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	L	Y	I	D	T	L	R	E	A	L	P	A	H	V	A	I	W	K	A	L	S	V	G	E	T	L	P	A	.	.	R	E	F	Q	H	V	D	K	Y	V	L	D	N	.	G	Q	G	G	S	G	Q	R	F	D	W	S	L	L	N	.	.	.	.	.	.	.	.	.	.	.	G	Q	S	L	G	N	V	L	L
Template Known Secondary structure												S		T	T	S									S	S	S				.	.				T	T								S	.		S			S	S					G	G	G	G	T	.	.	.	.	.	.	.	.	.	.	.	T	S			T	T
Template Predicted Secondary structure																															.	.														.																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.			.	.	370	.	.	.	.	.	.	.	.	.	380		.	.	.	.	.	.	.	.	.	390	.	.	.	.	.												.	.	.	.	400	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.				.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.
Query SS confidence																																.	.	.
Query Sequence		D	G	G	V	K	V	N	N	I	G	E	I	A	A	A	G	A	D	M	F	V	A	G	S	A	I	F	D	Q	P	.	.	.	D	Y	K	K	V	I	D	E	M	R	S
Query Conservation																																.	.	.
Alig confidence																																.	.	.
Template Conservation
Template Sequence		A	G	G	L	G	A	D	N	C	V	E	A	A	Q	T	G	C	A	G	L	D	F	N	S	A	V	E	S	Q	P	G	I	K	D	A	R	L	L	A	S	V	F	Q	T
Template Known Secondary structure			S	S			T	T	T						T	T			S						G	G	G				T	T
Template Predicted Secondary structure
Template SS confidence
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions