Job Description P0AG07 Confidence 98.46% Date Thu Jan 5 11:27:45 GMT 2012 Rank 117 Aligned Residues 195 % Identity 18% Template d1nsja_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 2.00

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Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.
Predicted Secondary structure																																																.	.																										.
Query SS confidence																																																.	.																										.
Query Sequence		M	K	Q	Y	L	I	A	P	S	I	L	S	A	D	F	A	R	L	G	E	D	T	A	K	A	L	A	A	G	A	D	V	V	H	F	D	V	M	D	N	H	Y	V	P	N	L	.	.	T	I	G	P	M	V	L	K	S	L	R	N	Y	G	I	T	A	P	I	D	V	H	L	M	V	.	K	P	V	D	R	I
Query Conservation																																																.	.																										.
Alig confidence										.	.	.	.	.	.					.																	.	.	.	.	.							.	.																										.
Template Conservation										.	.	.	.	.	.					.																	.	.	.	.	.
Template Sequence		M	V	R	V	K	I	C	G	.	.	.	.	.	.	I	T	N	L	.	E	D	A	L	F	S	V	E	S	G	A	D	A	V	G	F	.	.	.	.	.	V	F	Y	P	K	S	K	R	Y	I	S	P	E	D	A	R	R	I	S	V	E	L	P	P	F	V	F	R	V	G	V	F	V	N	E	E	P	E	K	I
Template Known Secondary structure										.	.	.	.	.	.			S		.										T		S					.	.	.	.	.				T	T		T	T	B													S		S	S	S							S	S
Template Predicted Secondary structure										.	.	.	.	.	.					.																	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.							.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.						.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	D	F	A	A	A	G	A	S	I	I	T	F	H	P	E	A	S	E	H	V	D	R	T	L	Q	L	I	K	E	N	G	C	K	A	G	L	V	F	N	P	A	T	P	L	S	Y	L	D	Y	V	M	D	K	L	D	V	I	L	L	M	S	V	N	P	G	F	G	G	Q	S	F	I	P	Q	T	L	D	K
Query Conservation
Alig confidence																	.	.	.														.																																				.
Template Conservation																	.	.	.														.																																				.
Template Sequence		L	D	V	A	S	Y	V	Q	L	N	A	V	Q	L	H	.	.	.	G	E	E	P	I	E	L	C	R	K	I	A	E	.	R	I	L	V	I	K	A	V	G	V	S	N	E	R	D	M	E	R	A	L	N	Y	R	E	F	P	I	L	L	D	T	K	T	P	E	.	Y	G	G	S	G	K	T	F	D	W	S	L
Template Known Secondary structure									T		S						.	.	.	S												T	.	T	S									S	S								G	G	G	T	T	S							S		S	S	.	S	S	S			S				G	G	G
Template Predicted Secondary structure																	.	.	.														.																																				.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.				.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.				.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.																	.	.	.
Query SS confidence																																			.																	.	.	.
Query Sequence		L	R	E	V	R	R	R	I	D	E	S	G	F	D	I	R	L	E	V	D	G	G	V	K	V	N	N	I	G	E	I	A	A	.	A	G	A	D	M	F	V	A	G	S	A	I	F	D	Q	P	.	.	.	D	Y	K	K	V	I	D	E	M	R	S	E
Query Conservation																																			.																	.	.	.
Alig confidence											.	.	.	.	.	.																			.																	.	.	.
Template Conservation											.	.	.	.	.	.
Template Sequence		I	L	P	Y	R	D	R	F	R	.	.	.	.	.	.	Y	L	V	L	S	G	G	L	N	P	E	N	V	R	S	A	I	D	V	V	R	P	F	A	V	D	V	S	S	G	V	E	A	F	P	G	K	K	D	H	D	S	I	K	M	F	I	K	N	A
Template Known Secondary structure		T	G	G	G	G	G	G	S	S	.	.	.	.	.	.						S	S			T	T	T											S					S	G	G	G				T	T
Template Predicted Secondary structure											.	.	.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.							.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions