Job Description P0AG07 Confidence 97.90% Date Thu Jan 5 11:27:45 GMT 2012 Rank 182 Aligned Residues 142 % Identity 20% Template d1m6ja_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 1.50

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		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.									.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.												.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Query Sequence		V	P	D	F	A	A	A	G	A	S	I	I	T	F	H	.	.	.	.	.	.	.	.	P	E	A	S	E	H	V	D	R	T	L	Q	L	I	K	E	N	G	C	K	A	G	L	V	F	N	P	A	T	P	.	.	.	.	.	.	.	.	.	.	.	L	S	Y	L	D	Y	V	M	D	K	L	D	.	.	.	.
Query Conservation																	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template Conservation
Template Sequence		V	G	M	L	V	D	C	Q	V	P	Y	V	I	L	G	H	S	E	R	R	Q	I	F	H	E	S	N	E	Q	V	A	E	K	V	K	V	A	I	D	A	G	L	K	V	I	A	C	I	G	E	T	E	A	Q	R	I	A	N	Q	T	E	E	V	V	A	A	Q	L	K	A	I	N	N	A	I	S	K	E	A	W
Template Known Secondary structure								T	T							S								S																		T																T	T																	S		T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
					135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.							.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure		.	.	.																																.	.	.	.	.	.																										.
Query SS confidence		.	.	.																																.	.	.	.	.	.																										.
Query Sequence		.	.	.	V	I	L	L	M	S	V	N	P	G	F	G	G	Q	S	F	I	P	Q	T	L	D	K	L	R	E	V	R	R	R	I	.	.	.	.	.	.	D	E	S	G	F	D	I	R	L	E	V	D	G	G	V	K	V	N	N	I	G	E	I	A	A	.	A	G	A	D	M	F	V	A	G	S	A	I	F	D
Query Conservation		.	.	.																																.	.	.	.	.	.																										.
Alig confidence		.	.	.																																.	.	.	.	.	.																										.
Template Conservation
Template Sequence		K	N	I	I	L	A	Y	E	P	V	W	A	I	G	T	G	K	T	A	T	P	D	Q	A	Q	E	V	H	Q	Y	I	R	K	W	M	T	E	N	I	S	K	E	V	A	E	A	T	R	I	Q	Y	G	G	S	V	N	P	A	N	C	N	E	L	A	K	K	A	D	I	D	G	F	L	V	G	G	A	S	L	D
Template Known Secondary structure		G	G								G	G	G	S	S	S	S																							T								S						S				T	T	T						T	S	T	T							S	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	D	Y	K	K	V	I	D	E	M	R	S	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	K	F	K	T	I	I	N	S	V	S	E	K	L
Template Known Secondary structure										G	G	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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