Job Description P0AG07 Confidence 74.58% Date Thu Jan 5 11:27:45 GMT 2012 Rank 423 Aligned Residues 192 % Identity 10% Template d1k77a_ SCOP info TIM beta/alpha-barrel Xylose isomerase-like Hypothetical protein YgbM (EC1530) Resolution 1.63

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.																						.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	E	D	T	A	K	A	L	A	A	G	A	D	V	V	H	F	D	V	M	D	N	H	Y	V	P	N	L	T	I	G	P	M	V	L	K	S	L	R	N	Y	G	I	T	A	P	I	D	V	H	L	M	V	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	R
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.
Template Sequence		F	I	E	R	F	A	A	A	R	K	A	G	F	D	A	V	E	F	.	.	.	.	.	.	.	L	F	P	Y	N	Y	S	T	L	Q	I	Q	K	Q	L	E	Q	N	H	L	T	L	A	L	F	N	T	A	P	G	D	I	N	A	G	E	W	G	L	S	A	L	P	G	R	E	H	E	A	H	A	D	I	D	L
Template Known Secondary structure		G	G	G									T		S					.	.	.	.	.	.	.	S			T	T	S												T	T													G	G	G	T		S		S	T	T		T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.								.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.															.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.									.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Query Sequence		I	V	P	D	F	A	A	A	G	A	S	I	I	T	F	H	P	E	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	H	V	D	R	T	L	Q	L	I	K	E	N	G	C	K	A	G	L	V	F	N	P	A	T	.	.	.	.	.	.	.	.	P	L	S	Y	L	D	Y	V	M	D	K	L	D
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	E	Y	A	L	A	L	N	C	E	Q	V	H	V	X	A	G	V	V	P	A	G	E	D	A	E	R	Y	R	A	V	F	I	D	N	I	R	Y	A	A	D	R	F	A	P	H	G	K	R	I	L	V	E	A	L	S	P	G	V	K	P	H	Y	L	F	S	S	Q	Y	Q	A	L	A	I	V	E	E	V	A
Template Known Secondary structure									T	T		S								B			T	T	S																					G	G	G	T										T	T	T	S	T	T	B	S			S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.					.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.																			.
Query SS confidence																																		.	.	.	.																			.
Query Sequence		V	I	L	L	M	S	V	N	P	G	F	G	G	Q	S	F	I	P	Q	T	L	D	K	L	R	E	V	R	R	R	I	D	.	.	.	.	E	S	G	F	D	I	R	L	E	V	D	G	G	V	K	V	N	N	.	I	G	E	I	A	A	A	G	A	D	M	F	V	A	G	S	A	I	F	D	Q	P	D	Y	K
Query Conservation																																		.	.	.	.																			.
Alig confidence																																		.	.	.	.																			.																	.
Template Conservation																																																																									.
Template Sequence		R	D	N	V	F	I	Q	L	D	T	F	H	A	Q	K	V	D	G	N	L	T	H	L	I	R	D	Y	A	G	K	Y	A	H	V	Q	I	A	G	L	P	D	R	H	E	P	D	D	G	E	I	N	Y	P	W	L	F	R	L	F	D	E	V	G	Y	Q	G	W	I	G	C	E	.	Y	K	P	R	G	L	T	E
Template Known Secondary structure			T	T														T										T	T	T	S									T	T	T				S	S	S	S	S	S												T	T			S						.				S	S		T	G
Template Predicted Secondary structure																																																																									.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.
		210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	I	D	E	M	R	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	G	L	G	W	F	D	A
Template Known Secondary structure		G	G	T
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions