Job Description P0AG07 Confidence 88.66% Date Thu Jan 5 11:27:45 GMT 2012 Rank 365 Aligned Residues 202 % Identity 12% Template d1gk8a1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.4

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.							40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																															.	.	.	.	.	.																																												.	.
Query SS confidence																															.	.	.	.	.	.																																												.	.
Query Sequence		L	S	A	D	F	A	R	L	G	E	D	T	A	K	A	L	A	A	G	A	D	V	V	H	F	D	V	M	D	.	.	.	.	.	.	N	H	Y	V	P	N	L	T	I	G	P	M	V	L	K	S	L	R	N	Y	G	I	T	A	P	I	D	V	H	L	M	V	K	P	V	D	R	I	V	P	D	F	A	.	.
Query Conservation																															.	.	.	.	.	.																																												.	.
Alig confidence																									.	.					.	.	.	.	.	.																																												.	.
Template Conservation																									.	.
Template Sequence		L	G	L	S	A	K	N	Y	G	R	A	V	Y	E	C	L	R	G	G	L	D	F	T	.	.	D	D	E	N	V	N	S	Q	P	F	M	R	W	R	D	R	F	L	F	V	A	E	A	I	Y	K	A	Q	A	E	T	G	E	V	K	G	H	Y	L	N	A	T	A	G	T	C	E	E	M	M	K	R	A	V	A
Template Known Secondary structure		S																	T	T		S	B		.	.			T	T		S	S	B	T	T	B																					S	S			B								S	S
Template Predicted Secondary structure																									.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200			.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
			83	.	.	.	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.											.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure		.														.	.																											.	.	.	.	.	.	.	.	.	.											.	.
Query SS confidence		.														.	.																											.	.	.	.	.	.	.	.	.	.											.	.
Query Sequence		.	A	A	G	A	S	I	I	T	F	H	P	E	A	.	.	S	E	H	V	D	R	T	L	Q	L	I	K	E	N	G	C	K	A	G	L	V	F	N	P	A	T	.	.	.	.	.	.	.	.	.	.	P	L	S	Y	L	D	Y	V	M	D	.	.	K	L	D	V	I	L	L	M	S	V	N	P	G	F	G	G
Query Conservation		.														.	.																											.	.	.	.	.	.	.	.	.	.											.	.
Alig confidence		.														.	.																											.	.	.	.	.	.	.	.	.	.											.	.															.	.
Template Conservation																																																																																.	.
Template Sequence		K	E	L	G	V	P	I	I	M	H	D	Y	L	T	G	G	F	T	A	N	T	S	L	A	I	Y	C	R	D	N	G	L	L	L	H	I	H	R	A	M	H	A	V	I	D	R	Q	R	N	H	G	I	H	F	R	V	L	A	K	A	L	R	M	S	G	G	D	H	L	H	S	G	T	V	V	G	K	L	.	.
Template Known Secondary structure		T	T	T	T		S																									T								T	T						S		S	S	S	S																S							S	S	S	S	S	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.																		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.											.							.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.											.							.
Query Sequence		Q	S	F	I	P	Q	T	L	D	K	L	R	E	V	R	R	R	I	D	E	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	I	R	L	E	V	D	G	G	V	K	V	N	N	I	G	E	I	A	A	A	.	G	A	D	M	F	V	A	G	S	A	.	I	F	D	Q	P	D	.
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.											.							.
Alig confidence		.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.											.							.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	E	G	E	R	E	V	T	L	G	F	V	D	L	M	R	D	D	Y	V	E	K	D	R	S	R	G	I	Y	F	T	Q	D	W	S	M	P	G	V	M	P	V	A	S	G	G	I	H	V	W	H	M	P	A	L	V	E	I	F	G	D	D	A	C	L	Q	F	G	G	G	T	L	G	H	P	W	G
Template Known Secondary structure		.	.	.	.																	S					B	G	G	G	T	B		S															S	S			G	G	G										S	S	S					S					T	S	T	T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
		208	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	K	K	V	I	D	E	M	R	S	E	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	A	P	G	A	A	A	N	R	V	A	L	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		413	.	.	.	.	.	.	420	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions