Job Description P0AG07 Confidence 99.86% Date Thu Jan 5 11:27:45 GMT 2012 Rank 32 Aligned Residues 209 % Identity 17% Template d1geqa_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 2.00

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		2	.	.	.	.	.	.	.	10	.	.			.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50																					.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	Q	Y	L	I	A	P	S	I	L	S	.	.	A	D	F	A	R	L	G	E	D	T	A	K	A	L	A	A	G	A	D	V	V	H	F	D	V	M	D	N	H	Y	V	P	N	L	T	I	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	V	L	K	S	L	R	N	Y
Query Conservation													.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.														.												.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.												.	.	.
Template Sequence		K	D	G	S	L	I	P	Y	L	T	A	G	D	P	D	K	Q	S	T	L	N	F	L	L	A	L	.	D	E	Y	A	G	A	I	E	L	G	I	.	.	.	P	F	S	D	P	I	A	D	G	K	T	I	Q	E	S	H	Y	R	A	L	K	N	G	F	K	L	R	E	A	F	W	I	V	K	E	F	R	R	H
Template Known Secondary structure			T	T								T	T	S	S													.	G	G	G	B	S							.	.	.			S			T	T	S														T	T															T	T
Template Predicted Secondary structure																												.												.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		60	.	.	.	.	.	.	.	.	.	70	.	.						.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure															.	.	.	.	.
Query SS confidence															.	.	.	.	.
Query Sequence		G	I	T	A	P	I	D	V	H	L	M	V	K	.	.	.	.	.	P	V	D	R	I	V	P	D	F	A	A	A	G	A	S	I	I	T	F	H	P	E	A	S	E	H	V	D	R	T	L	Q	L	I	K	E	N	G	C	K	A	G	L	V	F	N	P	A	T	P	L	S	Y	L	D	Y	V	M	D	K	L	D
Query Conservation															.	.	.	.	.
Alig confidence		.													.	.	.	.	.
Template Conservation		.
Template Sequence		.	S	S	T	P	I	V	L	M	T	Y	Y	N	P	I	Y	R	A	G	V	R	N	F	L	A	E	A	K	A	S	G	V	D	G	I	L	V	V	D	L	P	V	F	H	A	K	E	F	T	E	I	A	R	E	E	G	I	K	T	V	F	L	A	A	P	N	T	P	D	E	R	L	K	V	I	D	D	M	T	T
Template Known Secondary structure		.																														T							T	T			G	G	G												T									T	T														S
Template Predicted Secondary structure		.
Template SS confidence
			79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.
Predicted Secondary structure																																																																								.	.
Query SS confidence																																																																								.	.
Query Sequence		V	I	L	L	M	S	V	N	P	G	F	G	G	Q	S	F	I	P	Q	T	L	D	K	L	R	E	V	R	R	R	I	D	E	S	G	F	D	I	R	L	E	V	D	G	G	V	K	V	N	N	I	G	E	I	A	A	A	G	A	D	M	F	V	A	G	S	A	I	F	D	.	.	Q	P	D	Y	K	K	V	I
Query Conservation																																																																								.	.
Alig confidence														.	.	.	.	.																	.	.	.	.																																		.	.
Template Conservation														.	.	.	.	.																	.	.	.	.
Template Sequence		G	F	V	Y	L	V	S	L	Y	E	I	P	.	.	.	.	.	K	T	A	Y	D	L	L	R	R	A	K	R	I	C	R	N	.	.	.	.	K	V	A	V	G	F	G	V	S	K	R	E	H	V	V	S	L	L	K	E	G	A	N	G	V	V	V	G	S	A	L	V	K	I	I	G	E	K	G	R	E	A	T
Template Known Secondary structure		S												.	.	.	.	.															S	S	.	.	.	.						S				S										T	T		S																G	G	G
Template Predicted Secondary structure														.	.	.	.	.																	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.						170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.					.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		213	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	M	R	S	E	L	A	K	V	S	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	F	L	K	K	K	V	E	E	L	L	G
Template Known Secondary structure													T
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions