 |
Job Description | P0AG07 | Confidence | 71.52% | Date | Thu Jan 5 11:27:45 GMT 2012 |
Rank | 438 | Aligned Residues | 105 |
% Identity | 17% | Template | d1fmfa_ |
SCOP info | Flavodoxin-like
| Cobalamin (vitamin B12)-binding domain
| Cobalamin (vitamin B12)-binding domain
|
Resolution | UNK |
|
 |
  |   |
102 | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | |
. | . | . | . | . | . | . | . | . | 180 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . |
|
|  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | L | Q | L | I | K | E | N | G | C | K | A | G | L | V | F | N | P | A | T | P | L | S | Y | L | D | Y | V | M | D | K | L | D | V | I | L | L | M | S | V | N | P | G | F | G | G | Q | S | F | I | P | Q | T | L | D | K | L | R | E | V | R | R | R | I | D | E | S | G | F | . |
D | I | R | L | E | V | D | G | G | V |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   | . |   |   |   |
|   |   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |   |
|   |
|
|
|   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|
|   |   |
| . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |
|
|
|
|
|   |   |
Template Sequence |   |
L | D | H | S | F | T | N | A | G | F | N | V | V | N | I | G | V | L | S | S | Q | E | D | F | I | N | A | A | I | E | T | K | A | D | L | I | C | V | S | S | L | Y | . |
. |
. |
. |
. |
. |
. |
. |
G | Q | G | E | I | D | C | K | G | L | R | E | K | C | D | E | A | G | L | K | G | I | K | L | F | V | G | G | N | I |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T | T |
|  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  | S | S | . | . | . | . | . | . | . | . | S |
|  |  |  |  |  | T | T |  |  |  |  |  |  |  | T | T |
| T | T |
|  |  |  |  |  |  | S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . |
  |
  |   |
181 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
| . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | . |
. |
. |
. |
. |
. |
V | N | N | I | G | E | I | A | A | A | G | A | D | M | F | V | A | G | S | A | I | F | D | Q | P | D | Y | K | K | V | I | D | E | M | R | S | E | L |
Query Conservation |   |
  | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|
|
|
|
|
|   |   |
|   |
|
|   |   |   |   |   |   |
|   |   |   |
|
Alig confidence |   |
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   | . | . | . | . | . |
|   |   |   |   |   |
|
|
|   |   |
|   |   |   |
|
Template Sequence |   |
V | V | G | K | Q | N | W | P | D | V | E | Q | R | F | K | A | M | G | F | D | R | V | Y | P | . |
. |
. |
. |
. |
P | G | T | S | P | E | T | T | I | A | D | M | K | E | V | L |
Template Known Secondary structure |   |
S | S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |
| . | . | . | . | . | S | S |
|
| T |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
| . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
95 | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|