Job Description P0AG07 Confidence 96.66% Date Thu Jan 5 11:27:45 GMT 2012 Rank 260 Aligned Residues 171 % Identity 16% Template d1bxna1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.70

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.																			.	.	.
Query SS confidence																																																											.	.																			.	.	.
Query Sequence		K	Q	Y	L	I	A	P	S	I	L	S	A	D	F	A	R	L	G	E	D	T	A	K	A	L	A	A	G	A	D	V	V	H	F	D	V	M	D	N	H	Y	V	P	N	L	T	I	G	P	M	V	L	K	S	L	R	N	.	.	Y	G	I	T	A	P	I	D	V	H	L	M	V	K	P	V	D	R	.	.	.
Query Conservation																																																											.	.																			.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.														.	.																			.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.
Template Sequence		E	V	K	G	S	Y	L	N	V	T	A	G	T	M	E	E	M	Y	R	R	A	E	F	A	K	S	L	G	S	V	I	I	M	V	D	.	.	.	.	.	.	.	.	.	L	I	V	G	W	T	C	I	Q	S	M	S	N	W	C	R	Q	N	D	M	I	L	H	L	H	R	A	G	H	G	T	Y	T	R	Q	K
Template Known Secondary structure		S											S	S														T	T		S						.	.	.	.	.	.	.	.	.	G	G	G														T	T	T								T	T	T					S		T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.										.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
										77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.							.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	I	V	P	D	F	A	A	A	G	A	S	I	I	T	F	H	P	E	A	.	.	.	.	.	.	S	E	H	V	D	R	T	L	Q	L	I	K	E	N	G	C	K	A	G	L	V	F	N	P	A	T	P	L	S	Y	L	D	Y	V	M	D	K	L	D	V	I	L	L	M	S	V	N
Query Conservation		.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																				.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	H	G	V	S	F	R	V	I	A	K	W	L	R	L	A	G	V	D	H	M	H	T	G	T	A	V	G	K	L	E	G	D	P	L	T	V	Q	G	Y	Y	N	V	C	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Y	T	Q
Template Known Secondary structure		T	S	S														T		S							T	T	S	S	T	T																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.																															.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.											.							.
Query SS confidence																																																			.											.							.
Query Sequence		P	G	F	G	G	Q	S	F	I	P	Q	T	L	D	K	L	R	E	V	R	R	R	I	D	E	S	G	F	D	I	R	L	E	V	D	G	G	V	K	V	N	N	I	G	E	I	A	A	A	.	G	A	D	M	F	V	A	G	S	A	.	I	F	D	Q	P	D	.	Y	K	K	V	I	D	E	M	R	S	E	L
Query Conservation																																																			.											.							.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.																							.											.							.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	D	L	T	R	G	L	F	F	D	Q	D	W	A	S	L	.	.	.	.	.	.	.	.	.	.	.	R	K	V	M	P	V	A	S	G	G	I	H	A	G	Q	M	H	Q	L	I	H	L	F	G	D	D	V	V	L	Q	F	G	G	G	T	I	G	H	P	Q	G	I	Q	A	G	A	T	A	N	R	V	A	L
Template Known Secondary structure			B	G	G	G	T	B		S					T	T		.	.	.	.	.	.	.	.	.	.	.										S			G	G	G										S	S											T		T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.												.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
		220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		427	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions