Job Description P0AG07 Confidence 98.34% Date Thu Jan 5 11:27:45 GMT 2012 Rank 131 Aligned Residues 213 % Identity 17% Template d1aw1a_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 2.70

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.								.	.	.
Query SS confidence																																																																							.								.	.	.
Query Sequence		K	Q	Y	L	I	A	P	S	I	L	S	A	D	F	A	R	L	G	E	D	T	A	K	A	L	A	A	G	A	D	V	V	H	F	D	V	M	D	N	H	Y	V	P	N	L	T	I	G	P	M	V	L	K	S	L	R	N	Y	G	I	T	A	P	I	D	V	H	L	M	.	V	K	P	V	D	R	I	.	.	.
Query Conservation																																																																							.								.	.	.
Alig confidence																																						.	.	.																															.								.	.	.
Template Conservation																																						.	.	.
Template Sequence		H	P	V	V	M	G	N	W	K	L	N	G	S	K	E	M	V	V	D	L	L	N	G	L	N	A	E	L	E	G	V	T	G	V	D	V	.	.	.	A	V	A	P	P	A	L	F	V	D	L	A	E	R	T	L	T	E	A	G	S	A	I	I	L	G	A	Q	N	T	D	L	N	N	S	G	A	F	T	G	D
Template Known Secondary structure											S																		T	T	T			S	S			.	.	.						G	G	G												T								S				S		S	S	S	S		T	T
Template Predicted Secondary structure																																						.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.				.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
				78	.	80	.	.	.	.	.	.	.	.	.	90	.	.									.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.													.	.	.	.	130	.	.	.	.
Predicted Secondary structure		.	.																.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.										.
Query SS confidence		.	.																.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.										.
Query Sequence		.	.	V	P	D	F	A	A	A	G	A	S	I	I	T	F	H	.	.	.	.	.	.	.	.	P	E	A	S	E	H	V	D	R	T	L	Q	L	I	K	E	N	G	C	K	A	G	L	V	F	N	P	A	T	P	L	S	Y	.	.	.	.	.	.	.	.	.	.	.	.	L	D	Y	V	M	D	K	L	D	.
Query Conservation		.	.																.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.										.
Alig confidence		.	.																.	.	.	.	.	.	.	.																										.								.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation																																																				.
Template Sequence		M	S	P	A	M	L	K	E	F	G	A	T	H	I	I	I	G	H	S	E	R	R	E	Y	H	A	E	S	D	E	F	V	A	K	K	F	A	F	L	K	E	N	G	L	T	P	V	L	C	I	.	G	E	S	D	A	Q	N	E	A	G	E	T	M	A	V	C	A	R	Q	L	D	A	V	I	N	T	Q	G	V
Template Known Secondary structure								G	G	G	T							S								S																		T								.									T	T																			G
Template Predicted Secondary structure																																																				.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
								135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170						.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure		.	.	.	.	.	.																																					.	.	.	.	.																					.
Query SS confidence		.	.	.	.	.	.																																					.	.	.	.	.																					.
Query Sequence		.	.	.	.	.	.	V	I	L	L	M	S	V	N	P	G	F	G	G	Q	S	F	I	P	Q	T	L	D	K	L	R	E	V	R	R	R	I	D	E	S	G	F	.	.	.	.	.	D	I	R	L	E	V	D	G	G	V	K	V	N	N	I	G	E	I	A	A	.	A	G	A	D	M	F	V	A	G	S	A	I
Query Conservation		.	.	.	.	.	.																																					.	.	.	.	.																					.
Alig confidence		.	.	.	.	.	.																																					.	.	.	.	.																					.
Template Conservation
Template Sequence		E	A	L	E	G	A	I	I	A	Y	E	P	I	W	A	I	G	T	G	K	A	A	T	A	E	D	A	Q	R	I	H	A	Q	I	R	A	H	I	A	E	K	S	E	A	V	A	K	N	V	V	I	Q	Y	G	G	S	V	K	P	E	N	A	A	A	Y	F	A	Q	P	D	I	D	G	A	L	V	G	G	A	A
Template Known Secondary structure		G	G	G	T	T								G	G	G	T	T	T	S																					T	T														S				T	T	T						T	S	T	T							S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	Q	P	D	Y	K	K	V	I	D	E	M	R	S	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	A	K	S	F	A	A	I	A	K	A	A	A	E	A
Template Known Secondary structure		G	S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions