Job Description P0AG07 Confidence 97.70% Date Thu Jan 5 11:27:45 GMT 2012 Rank 205 Aligned Residues 86 % Identity 21% Template c3tdmD_ PDB info PDB header:de novo protein Chain: D: PDB Molecule:computationally designed two-fold symmetric tim-barrel PDBTitle: computationally designed tim-barrel protein, halfflr Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		121	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure													.																																																		.
Query SS confidence													.																																																		.
Query Sequence		T	P	L	S	Y	L	D	Y	V	M	D	.	K	L	D	V	I	L	L	M	S	V	N	P	G	F	G	G	Q	S	F	I	P	Q	T	L	D	K	L	R	E	V	R	R	R	I	D	E	S	G	F	D	I	R	L	E	V	D	G	G	V	.	K	V	N	N	I	G	E	I	A	A	A	G	A	D	M	F	V	A
Query Conservation													.																																																		.
Alig confidence													.																				.	.	.												.	.	.	.	.												.
Template Conservation																																	.	.	.												.	.	.	.	.
Template Sequence		L	L	R	D	W	V	V	E	V	E	K	R	G	A	G	E	I	L	L	T	S	I	D	R	D	G	T	K	S	G	Y	.	.	.	D	T	E	M	I	R	F	V	R	P	L	.	.	.	.	.	T	T	L	P	I	I	A	S	G	G	A	G	K	M	E	H	F	L	E	A	F	L	R	G	A	D	K	V	S	I
Template Known Secondary structure													T	T		S							S	S	S		S	S	S	S			.	.	.									G	G	G	.	.	.	.	.			S						S				S										T	T		S
Template Predicted Secondary structure																																	.	.	.												.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.				.	.	.	.	.	.	.	.	70	.	.						.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	A	I	F	D	Q	P	D	Y	K	K	V	I	D	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	T	A	A	V	E	N	P	S	L	I	T	Q	I	A	Q
Template Known Secondary structure		S							T								T
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions