Job Description P0AG07 Confidence 64.92% Date Thu Jan 5 11:27:45 GMT 2012 Rank 457 Aligned Residues 195 % Identity 11% Template c3t4cD_ PDB info PDB header:transferase Chain: D: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase 1; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from2 burkholderia ambifaria Resolution 1.95 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	A	R	L	G	E	D	T	A	K	A	L	A	A	G	A	D	V	V	H	F	D	V	M	D	N	H	Y	V	P	N	L	T	I	G	P	M	V	L	K	S	L	R	N	Y	G	I	T	A	P	I	D	V	H	L	M	V	K	P	V	D	R	I	V	P	D	F	A	A	A	G	A	S	I	I	T	F	H	P
Query Conservation
Alig confidence																					.	.	.	.	.	.	.																																						.								.
Template Conservation																					.	.	.	.	.	.	.																																						.								.
Template Sequence		S	E	Q	M	T	I	D	T	A	G	R	L	K	E	I	C	A	K	L	.	.	.	.	.	.	.	N	V	P	F	I	Y	K	S	S	M	D	E	G	L	R	I	L	G	E	V	K	R	Q	L	G	L	P	V	L	T	D	V	H	S	I	D	E	.	I	E	Q	V	A	S	V	.	V	D	V	L	Q	T	P	A
Template Known Secondary structure																				T	.	.	.	.	.	.	.	T																								T									S				.						T	T	.		S						G
Template Predicted Secondary structure																					.	.	.	.	.	.	.																																						.								.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.								.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.		.	.	90	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.											.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.
Query Sequence		E	A	S	E	H	V	D	R	T	L	Q	L	I	K	E	N	G	C	K	A	G	L	V	F	N	P	A	T	P	L	S	Y	L	D	Y	V	M	D	K	L	D	V	I	.	.	.	.	.	.	.	.	.	.	L	L	M	S	V	N	P	G	F	G	G	Q	S	F	I	P	Q	T	L	D	K	L	R	E	V	R	R
Query Conservation																																													.	.	.	.	.	.	.	.	.	.
Alig confidence							.																																						.	.	.	.	.	.	.	.	.	.
Template Conservation							.
Template Sequence		F	L	C	R	Q	.	T	D	F	I	H	A	C	A	R	S	G	K	P	V	N	I	K	K	G	Q	F	L	A	P	H	D	M	K	N	V	I	D	K	A	R	E	A	A	R	E	A	G	L	S	E	D	R	F	M	A	C	E	R	G	V	S	F	G	Y	N	N	L	V	S	D	M	R	S	L	A	I	M	R	E
Template Known Secondary structure		G	G	T	T		.									T	T	S	S								T	T	S		G	G	G															T	T			S													S	S	S												G	G	G
Template Predicted Secondary structure							.
Template SS confidence
		112	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		164	.	.	.	.	.	170	.	.	.	.	.	.	.									.	.	180	.			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.									.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.					.	.																											.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.					.	.																											.	.	.	.	.	.	.	.
Query Sequence		R	I	D	E	S	G	F	D	I	R	L	E	V	D	.	.	.	.	.	.	.	.	G	G	V	K	.	.	V	N	N	I	G	E	I	A	A	A	G	A	D	M	F	V	A	G	S	A	I	F	D	Q	P	D	.	.	.	.	.	.	.	.	Y	K	K	V	I	D	E	M	R	S	E	L	A	K	V	S	H
Query Conservation																.	.	.	.	.	.	.	.					.	.																											.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.							.	.	.	.	.	.	.	.					.	.																											.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.
Template Sequence		T	S	.	.	.	.	.	.	A	P	V	V	F	D	A	T	H	S	V	Q	L	P	G	Q	R	E	F	V	P	V	L	A	R	A	A	V	A	T	G	V	A	G	L	F	M	E	T	H	P	N	P	A	E	A	K	S	D	G	P	N	A	V	P	L	N	R	M	G	A	L	L	E	T	L	V	T	L	D	Q
Template Known Secondary structure		G	S	.	.	.	.	.	.	S										T						T	T															S								S		T	T	T			T	T	S		S				G	G	G
Template Predicted Secondary structure				.	.	.	.	.	.
Template SS confidence
		191	.							.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions