Job Description P0AG07 Confidence 91.30% Date Thu Jan 5 11:27:45 GMT 2012 Rank 352 Aligned Residues 184 % Identity 14% Template c3qfeB_ PDB info PDB header:lyase Chain: B: PDB Molecule:putative dihydrodipicolinate synthase family protein; PDBTitle: crystal structures of a putative dihydrodipicolinate synthase family2 protein from coccidioides immitis Resolution 2.35 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.													.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.						.	.	.	60	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.
Query Sequence		M	K	Q	Y	L	I	A	P	S	I	L	S	A	.	.	.	.	.	.	.	.	.	.	.	.	D	F	A	R	L	G	E	D	T	A	K	A	L	A	A	G	A	D	V	V	H	F	D	V	M	D	N	H	Y	V	P	N	L	T	I	G	P	M	V	L	K	S	L	.	.	.	.	.	R	N	Y	G	I	T	A
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.																		.	.	.	.	.
Template Conservation																																																		.	.	.
Template Sequence		M	V	P	R	V	P	Q	P	G	I	W	C	P	A	V	T	F	F	D	S	K	T	D	T	L	D	L	A	S	Q	E	R	Y	Y	A	Y	L	A	R	S	G	L	T	G	L	V	I	L	.	.	.	G	T	N	A	E	A	F	L	L	T	R	E	E	R	A	Q	L	I	A	T	A	R	K	A	V	G	P	D	F
Template Known Secondary structure					S	S			S												T	T	T	T																T	T	T		S					T	.	.	.		G	G	G	T	G	G	G	S																		T	T	S
Template Predicted Secondary structure																																																		.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		64	.	.	.	.	.	70	.	.	.	.	.	.	.				.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.					110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure																.	.	.																																	.	.	.	.								.
Query SS confidence																.	.	.																																	.	.	.	.								.
Query Sequence		P	I	D	V	H	L	M	V	K	P	V	D	R	I	.	.	.	V	P	D	F	A	A	A	G	A	S	I	I	T	F	H	P	E	A	S	E	H	V	D	R	T	L	Q	L	I	K	E	N	.	.	.	.	G	C	K	A	G	L	V	.	F	N	P	A	T	P	L	S	Y	L	D	Y	V	M	D	K	L	D	V
Query Conservation																.	.	.																																	.	.	.	.								.
Alig confidence																.	.	.																																	.	.	.	.								.
Template Conservation
Template Sequence		P	I	M	A	G	V	G	A	H	S	T	R	Q	V	L	E	H	I	N	D	A	S	V	A	G	A	N	Y	V	L	V	L	P	P	A	Y	T	T	P	P	V	I	K	S	F	F	D	D	V	S	C	Q	S	P	L	P	V	V	I	Y	N	F	P	I	D	L	D	S	D	M	I	T	T	I	A	R	K	N	P	N
Template Known Secondary structure										S	S															T		S																											S	S																					T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	L	M	S	V	N	P	G	F	G	G	Q	S	F	I	P	Q	T	L	D	K	L	R	E	V	R	R	R	I	D	E	S	G	F	D	I	R	L	E	V	D	G	G	V	K	V	N	N	I	G	E	I	A	A	A	G	A	D	M	F	V	A	G	S	A
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.																															.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.																															.	.	.	.	.
Template Sequence		V	V	G	V	.	.	.	.	.	.	.	.	.	K	L	T	C	A	S	V	G	K	I	T	R	L	A	A	T	L	P	P	A	A	F	S	V	F	G	G	Q	S	D	.	.	.	.	.	F	L	I	G	G	L	S	V	G	S	A	G	C	I	A	A	F	A
Template Known Secondary structure						.	.	.	.	.	.	.	.	.			S	S													S		T	T	T								G	G	.	.	.	.	.	G							T	T							G	G	G
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.																															.	.	.	.	.
Template SS confidence
		167	.	.	170										.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200						.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions