Job Description P0AG07 Confidence 90.71% Date Thu Jan 5 11:27:45 GMT 2012 Rank 354 Aligned Residues 203 % Identity 18% Template c3pg8B_ PDB info PDB header:transferase Chain: B: PDB Molecule:phospho-2-dehydro-3-deoxyheptonate aldolase; PDBTitle: truncated form of 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase2 from thermotoga maritima Resolution 2.00 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	I	A	P	S	I	L	S	A	D	F	A	R	L	G	E	D	T	A	K	A	L	A	A	G	A	D	V	V	H	F	D	V	M	D	N	H	Y	V	P	N	L	T	I	G	P	M	V	L	K	S	L	R	N	Y	G	I	T	A	P	I	D	V	H	L	M	V	K	P	V	D	R	I	V	P	D	F	A	A
Query Conservation
Alig confidence									.	.																									.	.	.	.					.	.	.	.																													.
Template Conservation									.	.																									.	.	.	.					.	.	.	.																													.
Template Sequence		I	I	A	G	P	S	V	.	.	E	G	R	E	M	L	M	E	T	A	H	F	L	S	E	L	G	V	K	V	L	R	G	G	.	.	.	.	A	Y	K	L	.	.	.	.	G	E	K	G	L	E	Y	L	R	E	A	A	D	K	Y	G	M	Y	V	V	T	E	A	L	G	E	D	D	.	L	P	K	V	A	E
Template Known Secondary structure									.	.																T	T								.	.	.	.				.	.	.	.	.															T	T									S	G	G	G	.
Template Predicted Secondary structure									.	.																									.	.	.	.					.	.	.	.																													.
Template SS confidence
		97	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.					.	.	130	.					.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.							.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.
Query Sequence		A	G	A	S	I	I	T	F	H	P	E	A	S	E	H	V	D	R	T	L	Q	L	I	K	E	N	G	C	K	A	G	L	V	F	N	P	A	T	P	L	S	Y	L	D	Y	V	M	D	K	L	.	.	.	.	.	.	D	V	I	L	L	M	S	V	N	P	G	F	G	G	Q	S	F	I	P	Q	T	L	D	K
Query Conservation																																																				.	.	.	.	.	.
Alig confidence			.																.																																	.	.	.	.	.	.
Template Conservation			.																.
Template Sequence		Y	.	A	D	I	I	Q	I	G	A	R	N	A	Q	N	F	R	.	L	L	S	K	A	G	S	Y	N	K	P	V	L	L	K	R	G	F	M	N	T	I	E	E	F	L	L	S	A	E	Y	I	A	N	S	G	N	T	K	I	I	L	C	E	R	G	I	R	T	F	E	K	A	T	R	N	T	L	D	I	S	A
Template Known Secondary structure			.		S						G	G	G	T	T				.						G	G	G		S								T	T																T	T											B			S		S	S	S	S	S	B			T	T
Template Predicted Secondary structure			.																.
Template SS confidence
		177		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.								.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.									.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Query Sequence		L	R	E	V	R	R	R	I	D	E	S	G	F	D	I	R	L	E	V	D	G	G	V	K	.	.	.	.	.	.	.	V	N	N	I	G	E	I	A	A	A	G	A	D	M	F	V	A	G	S	A	I	F	D	Q	P	D	.	.	.	.	.	.	.	.	Y	K	K	V	I	D	E	M	R	S	E	L	A	K	V
Query Conservation																										.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.													.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.
Template Sequence		V	P	I	I	R	K	E	.	.	.	.	.	S	H	L	P	I	L	V	D	P	S	H	S	G	G	R	R	D	L	V	I	P	L	S	R	A	A	I	A	V	G	A	H	G	I	I	V	E	V	H	P	E	P	E	K	A	L	S	D	G	K	Q	S	L	D	F	E	L	F	K	E	L	V	Q	E	M	K	K	L
Template Known Secondary structure									.	.	.	.	.	B	S	S						T	T	T	T	T			G	G	G												T		S						B		S		T	T	T		S	S	S	G	G	G		B
Template Predicted Secondary structure									.	.	.	.	.
Template SS confidence
		255	.	.	.	.	260	.						.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		223	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		330	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions