Job Description P0AG07 Confidence 87.63% Date Thu Jan 5 11:27:45 GMT 2012 Rank 374 Aligned Residues 221 % Identity 15% Template c3p6lA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:sugar phosphate isomerase/epimerase; PDBTitle: crystal structure of a sugar phosphate isomerase/epimerase (bdi_1903)2 from parabacteroides distasonis atcc 8503 at 1.85 a resolution Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.							.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.								.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.																							.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.																							.	.	.	.	.	.	.
Query Sequence		Q	Y	L	I	A	P	S	I	L	S	A	D	F	A	R	L	G	E	D	T	A	K	A	L	A	A	G	A	D	V	V	H	F	D	.	.	.	.	.	.	V	M	D	N	H	Y	V	P	N	L	T	I	G	P	M	V	L	K	S	L	R	N	.	.	.	.	.	.	.	Y	G	I	T	A	P	I	D	V	H	L
Query Conservation																																				.	.	.	.	.	.																							.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.																							.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	W	R	L	G	X	Q	S	Y	S	F	H	L	F	P	L	T	E	A	L	D	K	T	Q	E	L	G	L	K	Y	I	E	I	Y	P	G	H	K	L	G	G	K	W	G	D	K	V	F	D	F	N	L	D	A	Q	T	Q	K	E	I	K	E	L	A	A	S	K	G	I	K	I	V	G	T	G	V	Y	V	A	E
Template Known Secondary structure		T							G	G	G	G	T	T	S												T	T								T	T					G	G	G	T	T				S	T	T																T	T												S
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.					120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.
Query SS confidence																																																				.	.	.	.
Query Sequence		M	V	K	P	V	D	R	I	V	P	D	F	A	A	A	G	A	S	I	I	T	F	H	P	E	A	S	E	H	V	D	R	T	L	Q	L	I	K	E	N	G	C	K	A	G	L	V	F	N	P	.	.	.	.	A	T	P	L	S	Y	L	D	Y	V	M	D	K	L	D	V	I	L	L	M	S	V	N	P	G	F
Query Conservation																																																				.	.	.	.
Alig confidence																											.																									.	.	.	.
Template Conservation																											.
Template Sequence		K	S	S	D	W	E	K	X	F	K	F	A	K	A	X	D	L	E	F	I	T	C	E	P	A	.	L	S	D	W	D	L	V	E	K	L	S	K	Q	Y	N	I	K	I	S	V	H	N	H	P	Q	P	S	D	Y	W	K	P	E	N	L	L	K	A	I	S	G	R	S	Q	S	L	G	S	C	S	D	V	G	H
Template Known Secondary structure		S	T	T												T	T		S								.	G	G	G												T									S	S	S	S	S	S	S	S									T	T	S		T	T
Template Predicted Secondary structure																											.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.														.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query Sequence		G	G	Q	S	F	I	P	Q	T	L	D	K	L	R	E	V	R	R	R	I	D	E	S	G	F	D	.	.	.	.	.	.	.	.	.	.	.	.	.	I	R	L	E	V	D	G	G	V	K	.	V	N	N	I	G	E	I	A	A	A	G	A	D	M	F	V	A	G	S	A	I	F	D	Q	P	D	Y	K	K	V
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.											.
Alig confidence			.																									.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation			.
Template Sequence		W	.	R	R	E	G	L	N	Q	I	D	C	L	K	Q	L	K	G	R	I	I	S	L	H	F	K	D	I	A	P	K	K	A	G	E	N	E	Q	H	D	V	I	W	G	T	G	I	L	D	V	K	G	X	L	K	E	L	K	S	Q	N	F	K	G	V	F	S	I	E	Y	E	Y	N	W	E	N	S	V	P	D
Template Known Secondary structure			.			T	T										T	T	T															T	T		S							T	T	S	S	S	S												T	T											S	S	T	T	S
Template Predicted Secondary structure			.
Template SS confidence
		190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	E	M	R	S	E	L	A	K	V	S	H	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	K	E	C	I	Q	Y	F	N	K	T	A	N	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions