Job Description P0AG07 Confidence 90.16% Date Thu Jan 5 11:27:45 GMT 2012 Rank 356 Aligned Residues 175 % Identity 15% Template c3ng3A_ PDB info PDB header:lyase Chain: A: PDB Molecule:deoxyribose-phosphate aldolase; PDBTitle: crystal structure of deoxyribose phosphate aldolase from mycobacterium2 avium 104 in a schiff base with an unknown aldehyde Resolution 2.15 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.				.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.														.	.	.
Query SS confidence																																																							.	.														.	.	.
Query Sequence		S	A	D	F	A	R	L	G	E	D	T	A	K	A	L	A	A	G	A	D	V	V	H	F	D	V	M	D	N	H	Y	V	P	N	L	T	I	G	P	M	V	L	K	S	L	R	N	Y	G	I	T	A	P	.	.	I	D	V	H	L	M	V	K	P	V	D	R	I	.	.	.	V	P	D	F	A	A	A	G	A
Query Conservation																																																							.	.														.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.														.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	A	T	A	A	D	V	A	A	L	V	T	E	A	A	E	L	G	V	Y	A	V	C	V	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	P	M	V	P	A	A	V	Q	A	G	A	R	V	A	S	V	A	G	F	P	S	G	K	H	V	S	A	V	K	A	H	E	A	A	L	A	V	A	S	G	A
Template Known Secondary structure		T																	T		S					.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G							T									S	T	T	T			S															T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.														.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		87	.	.	90	.	.								.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.								.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure								.	.	.	.	.	.	.																															.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.																															.	.	.	.	.	.	.
Query Sequence		S	I	I	T	F	H	.	.	.	.	.	.	.	P	E	A	S	E	H	V	D	R	T	L	Q	L	I	K	E	N	G	C	K	A	G	L	V	F	N	P	A	T	P	.	.	.	.	.	.	.	L	S	Y	L	D	Y	V	M	D	K	L	D	V	I	L	L	M	S	V	N	P	G	F	G	G	Q	S	F	I	P
Query Conservation								.	.	.	.	.	.	.																															.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.																															.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	E	I	D	M	V	I	D	V	G	A	A	L	A	G	D	L	D	G	V	R	A	D	I	A	A	V	R	G	A	V	G	G	A	V	L	K	V	I	V	E	S	S	A	L	L	A	L	A	D	E	H	T	L	V	R	V	C	R	A	A	E	D	A	G	A	D	F	V	K	T	S	T	G	F	H	P	S	G	G
Template Known Secondary structure		S													T	T																	T	T	S															S															T	T		S							S			T	T		S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		Q	T	L	D	K	L	R	E	V	R	R	R	I	D	E	S	G	F	D	I	R	L	E	V	D	G	G	V	K	.	V	N	N	I	G	E	I	A	A	A	G	A	D	M	F	V	A	G	S	A	I
Query Conservation																															.
Alig confidence															.	.	.														.
Template Conservation															.	.	.
Template Sequence		A	S	V	R	A	V	A	L	M	A	E	A	V	.	.	.	G	G	R	L	G	V	K	A	S	G	G	I	R	T	A	A	D	A	L	A	M	L	D	A	G	A	T	R	L	G	L	S	G	T	R
Template Known Secondary structure															.	.	.	T	T	S	S						S	S			S										T	T		S					S	S
Template Predicted Secondary structure															.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.				.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions