Job Description P0AG07 Confidence 60.92% Date Thu Jan 5 11:27:45 GMT 2012 Rank 469 Aligned Residues 171 % Identity 15% Template c3na8A_ PDB info PDB header:lyase Chain: A: PDB Molecule:putative dihydrodipicolinate synthetase; PDBTitle: crystal structure of a putative dihydrodipicolinate synthetase from2 pseudomonas aeruginosa Resolution 1.85 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.						.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.				.	.	80	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.																				.	.	.
Query SS confidence																																																	.	.	.	.	.																				.	.	.
Query Sequence		S	A	D	F	A	R	L	G	E	D	T	A	K	A	L	A	A	G	A	D	V	V	H	F	D	V	M	D	N	H	Y	V	P	N	L	T	I	G	P	M	V	L	K	S	L	R	N	.	.	.	.	.	Y	G	I	T	A	P	I	D	V	H	L	M	V	K	P	V	D	R	I	.	.	.	V	P	D	F	A	A
Query Conservation																																																	.	.	.	.	.																				.	.	.
Alig confidence																								.	.	.																							.	.	.	.	.																				.	.	.
Template Conservation																								.	.	.
Template Sequence		G	L	D	L	P	A	L	G	R	S	I	E	R	L	I	D	G	G	V	H	A	I	.	.	.	A	P	L	G	S	T	G	E	G	A	Y	L	S	D	P	E	W	D	E	V	V	D	F	T	L	K	T	V	A	H	R	V	P	T	I	V	S	V	S	D	L	T	T	A	K	T	V	R	R	A	Q	F	A	E	S
Template Known Secondary structure		S	B															T	T		S			.	.	.			S	S	G	G	G	T	G	G	G	S																	T	T	S	S		B							S	S
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.				.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.						.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.						.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure												.	.	.	.	.																.															.	.	.	.	.
Query SS confidence												.	.	.	.	.																.															.	.	.	.	.
Query Sequence		A	G	A	S	I	I	T	F	H	P	.	.	.	.	.	E	A	S	E	H	V	D	R	T	L	Q	L	I	K	E	.	N	G	C	K	A	G	L	V	F	N	P	A	T	P	.	.	.	.	.	L	S	Y	L	D	Y	V	M	D	K	L	D	V	I	L	L	M	S	V	N	P	G	F	G	G	Q	S	F	I	P
Query Conservation												.	.	.	.	.																.															.	.	.	.	.
Alig confidence												.	.	.	.	.																.															.	.	.	.	.																		.	.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.	.
Template Sequence		L	G	A	E	A	V	X	V	L	P	I	S	Y	W	K	L	N	E	A	E	V	F	Q	H	Y	R	A	V	G	E	A	I	G	V	P	V	X	L	Y	N	N	P	G	T	S	G	I	D	X	S	V	E	L	I	L	R	I	V	R	E	V	D	N	V	T	X	V	.	.	.	.	.	.	.	.	.	K	E	S	T
Template Known Secondary structure		T	T		S									S	S																			S	S												S															S	T	T					.	.	.	.	.	.	.	.	.				S
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.										.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	L	D	K	L	R	E	V	R	R	R	I	D	E	S	G	F	D	I	R	L	E	V	D	G	G	V	K	V	N	N	I	G	E	I	A	A	A	G	A	D	M	F	V	A	G	S	A
Query Conservation
Alig confidence														.	.	.	.											.	.	.
Template Conservation														.	.	.	.											.	.	.
Template Sequence		G	D	I	Q	R	X	H	K	L	R	L	L	.	.	.	.	G	E	G	R	V	P	F	Y	N	G	.	.	.	N	P	L	A	L	E	A	F	V	A	G	A	K	G	W	C	S	A	A	P
Template Known Secondary structure		S												.	.	.	.	T	T	T		S						.	.	.		T	T								T		S					S	G	G
Template Predicted Secondary structure														.	.	.	.											.	.	.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200					.	.	.	.	.	.	.	.	.	210				.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions