Job Description P0AG07 Confidence 96.20% Date Thu Jan 5 11:27:45 GMT 2012 Rank 277 Aligned Residues 218 % Identity 11% Template c3lmzA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:putative sugar isomerase; PDBTitle: crystal structure of putative sugar isomerase. (yp_001305105.1) from2 parabacteroides distasonis atcc 8503 at 1.44 a resolution Resolution 1.44 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.				.	.	80
Predicted Secondary structure																																																																												.	.	.
Query SS confidence																																																																												.	.	.
Query Sequence		Y	L	I	A	P	S	I	L	S	A	D	F	A	R	L	G	E	D	T	A	K	A	L	A	A	G	A	D	V	V	H	F	D	V	M	D	N	H	Y	V	P	N	L	T	I	G	P	M	V	L	K	S	L	R	N	Y	G	I	T	A	P	I	D	V	H	L	M	V	K	P	V	D	R	I	.	.	.	V	P	D
Query Conservation																																																																												.	.	.
Alig confidence																																																																												.	.	.
Template Conservation
Template Sequence		F	H	L	G	X	A	G	Y	T	F	V	N	F	D	L	D	T	T	L	K	T	L	E	R	L	D	I	H	Y	L	C	I	K	D	F	H	L	P	L	N	S	T	D	E	Q	I	R	A	F	H	D	K	C	A	A	H	K	V	T	G	Y	A	V	G	P	I	Y	X	K	S	E	E	E	I	D	R	A	F	D	Y
Template Known Secondary structure		S						G	G	G	G	T	T	S												T	T								T	T	T	S		T	T																T	T													S
Template Predicted Secondary structure
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.						.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.
Query SS confidence																																											.	.	.	.	.
Query Sequence		F	A	A	A	G	A	S	I	I	T	F	H	P	E	A	S	E	H	V	D	R	T	L	Q	L	I	K	E	N	G	C	K	A	G	L	V	F	N	P	A	T	.	.	.	.	.	P	L	S	Y	L	D	Y	V	M	D	K	L	D	V	I	L	L	M	S	V	N	P	G	F	G	G	Q	S	F	I	P	Q	T	L
Query Conservation																																											.	.	.	.	.
Alig confidence																.																											.	.	.	.	.																												.
Template Conservation																.																																																											.
Template Sequence		A	K	R	V	G	V	K	L	I	V	G	V	P	N	.	Y	E	L	L	P	Y	V	D	K	K	V	K	E	Y	D	F	H	Y	A	I	H	L	H	G	P	D	I	K	T	Y	P	D	A	T	D	V	W	V	H	T	K	D	L	D	P	R	I	G	X	C	L	D	V	G	H	D	L	R	.	N	G	C	D	P	V
Template Known Secondary structure						T		S								.	G	G	G												T										T	T		S	S	S		S									T	T	S		T	T													.	T	T
Template Predicted Secondary structure																.																																																											.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.
		156	.	.	.	160	.	.	.	.	.	.	.											.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.																		.
Query SS confidence														.	.	.	.	.	.	.	.	.	.																		.
Query Sequence		D	K	L	R	E	V	R	R	R	I	D	E	.	.	.	.	.	.	.	.	.	.	S	G	F	D	I	R	L	E	V	D	G	G	V	K	V	N	N	.	I	G	E	I	A	A	A	G	A	D	M	F	V	A	G	S	A	I	F	D	Q	P	D	Y	K	K	V	I	D	E	M	R	S	E	L	A	K	V	S
Query Conservation														.	.	.	.	.	.	.	.	.	.																		.
Alig confidence														.	.	.	.	.	.	.	.	.	.																		.
Template Conservation
Template Sequence		A	D	L	K	K	Y	H	T	R	V	F	D	X	H	I	K	D	V	T	D	S	S	K	A	G	V	G	I	E	I	G	R	G	K	I	D	F	P	A	L	I	R	X	X	R	E	V	N	Y	T	G	X	C	S	L	E	Y	E	K	D	X	K	D	P	F	L	G	I	A	E	S	I	G	Y	F	K	A	V	S
Template Known Secondary structure								G	G	G										S		S	S	T	T						T	T	S	S	S													T	T			S								S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions