 |
Job Description | P0AG07 | Confidence | 75.72% | Date | Thu Jan 5 11:27:45 GMT 2012 |
Rank | 419 | Aligned Residues | 172 |
% Identity | 12% | Template | c3l9cA_ |
PDB info |
PDB header:lyase | Chain: A: PDB Molecule:3-dehydroquinate dehydratase; |
PDBTitle: the crystal structure of smu.777 from streptococcus mutans ua159
|
Resolution | 1.60 Å |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | |
|
|
|
|
|
|
|
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
K | Q | Y | L | I | A | P | S | I | L | S | A | D | F | A | R | L | G | E | D | T | A | K | A | L | A | A | G | A | D | V | V | H | F | D | V | M | D | N | H | Y | V | P | N | L | T | I | G | P | M | V | L | K | S | L | R | N | Y | G | I | T | A | P | I | D | V | H | L | M | V | K | P | . |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
|
|   |   |
|   |
|   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|   |
|   |
|
|   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |
|
|
|   |
|   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   | . |   |   |   |   |
|   |
|
|
|
|
| . | . | . |
|   |
|   |   |   |   |   | . |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|   |
|   |
|   |   |   |
|
|
|   |   |   |   |   |
Template Sequence |   |
R | S | M | K | I | V | V | P | V | M | P | Q | N | I | E | E | A | N | Q | L | D | L | T | R | . |
I | D | S | T | D | I | I | E | W | R | A | . |
. |
. |
D | Y | L | V | K | D | D | I | . |
L | T | V | A | P | A | I | F | E | K | F | S | G | H | E | V | I | F | T | L | R | T | E | K | E | G | G | N | I | S | L | S |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
| S | S |  |  |  |  |  |  |
|
|
| T | T | . |
|
| T | T |
|  |  |  |  |  | G | . | . | . | G | G | S |
| G | G | G |  | . |  |  |  |  |  |  |  |  |  |  | T | T | T | S |  |  |  |  |  |
|
| B | G | G | G | T |
| S | B |
|
|
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|
|  |  |  |  |  |  | . | . | . |  |  |
|
|
|  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|