Job Description P0AG07 Confidence 98.27% Date Thu Jan 5 11:27:45 GMT 2012 Rank 138 Aligned Residues 158 % Identity 12% Template c3l52A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:orotidine 5'-phosphate decarboxylase; PDBTitle: crystal structure of putative orotidine 5'-phosphate2 decarboxylase from streptomyces avermitilis ma-4680 Resolution 1.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.					.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																		.	.																			.	.	.	.													.																											.
Query SS confidence																		.	.																			.	.	.	.													.																											.
Query Sequence		M	V	L	K	S	L	R	N	Y	G	I	T	A	P	I	D	.	.	V	H	L	M	V	K	P	V	D	R	I	V	P	D	F	A	A	A	.	.	.	.	G	A	S	I	I	T	F	H	P	E	A	S	.	E	H	V	D	R	T	L	Q	L	I	K	E	N	G	C	K	A	G	L	V	F	N	P	A	T	P	.
Query Conservation																		.	.																			.	.	.	.													.																											.
Alig confidence																		.	.																			.	.	.	.													.																											.
Template Conservation
Template Sequence		K	T	V	A	E	A	R	A	A	G	A	L	V	V	X	D	A	K	R	G	D	I	G	S	T	X	A	A	Y	A	E	A	F	L	R	K	D	S	P	L	F	S	D	A	L	T	V	S	P	Y	L	G	Y	G	S	L	R	P	A	V	E	L	A	R	E	S	G	A	G	L	F	V	L	A	L	T	S	N	P	E
Template Known Secondary structure										T	T																								S	S	T	T	S	T	T			S							T	T		G	G	G	G											T											S	T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
																					123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																									.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																									.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	Y	L	D	Y	V	M	D	K	L	D	V	I	L	L	M	S	V	N	P	G	F	G	G	Q	S	F	I	P	Q	T	L	D	K	L	R	E	V	R	R	R	I	D	E	S	G	F	D	I	R	L	E	V	D	G	.	G	V	K	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																									.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	G	E	V	Q	H	A	V	R	T	D	G	R	D	V	A	A	T	X	L	A	H	L	A	A	E	N	A	G	E	E	P	L	G	S	F	G	A	V	V	G	A	T	L	G	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	Y	D	L	D	I	N	G	P	L	L	A	P	G	I	G	A	Q	G
Template Known Secondary structure		T					T		B		T	T	S		B													T	T	T		S	S			S							T	T		S		G	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	S				S	S	S							T	T	S	T	T
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.														.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.						.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure														.	.	.	.	.
Query SS confidence														.	.	.	.	.
Query Sequence		N	N	I	G	E	I	A	A	A	G	A	D	.	.	.	.	.	M	F	V	A	G	S	A	I	F	D	Q	P	D	Y	K	K	V	I	D	E	M	R	S	E	L	A	K
Query Conservation														.	.	.	.	.
Alig confidence														.	.	.	.	.
Template Conservation
Template Sequence		A	A	P	A	D	L	P	G	V	F	G	A	A	V	R	N	V	V	P	N	V	S	R	G	V	L	R	H	G	P	D	V	R	A	L	R	T	A	A	D	R	F	A	E
Template Known Secondary structure			S	G	G	G						G	G	G	G	G	G						S					T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions