Job Description P0AG07 Confidence 91.17% Date Thu Jan 5 11:27:45 GMT 2012 Rank 353 Aligned Residues 208 % Identity 12% Template c3k13A_ PDB info PDB header:transferase Chain: A: PDB Molecule:5-methyltetrahydrofolate-homocysteine methyltransferase; PDBTitle: structure of the pterin-binding domain metr of 5-2 methyltetrahydrofolate-homocysteine methyltransferase from3 bacteroides thetaiotaomicron Resolution 2.00 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.			.	.	.	.
Predicted Secondary structure																																																																												.	.
Query SS confidence																																																																												.	.
Query Sequence		I	L	S	A	D	F	A	R	L	G	E	D	T	A	K	A	L	A	A	G	A	D	V	V	H	F	D	V	M	D	N	H	Y	V	P	N	L	T	I	G	P	M	V	L	K	S	L	R	N	Y	G	I	T	A	P	I	D	V	H	L	M	V	K	P	V	D	R	I	V	P	D	F	A	A	.	.	A	G	A	S
Query Conservation																																																																												.	.
Alig confidence																													.																																								.							.	.
Template Conservation																													.																																								.
Template Sequence		V	N	E	K	K	Y	D	E	A	L	S	I	A	R	Q	Q	V	E	D	G	A	L	V	I	D	V	N	.	X	D	D	G	L	L	D	A	R	T	E	X	T	T	F	L	N	L	I	X	S	E	P	E	I	A	R	V	P	V	X	I	D	S	S	K	W	E	V	.	I	E	A	G	L	K	C	L	Q	G	K	S
Template Known Secondary structure				T	T															T	T		S						.				T	T	S															T						T	S							S					.									S	S
Template Predicted Secondary structure																													.																																								.
Template SS confidence
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.		.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.		.	.	440	.	.	.	.	.	.	.	.	.
		88	.			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.						.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.									.	140	.	.	.						.	.	.	.
Predicted Secondary structure				.	.																														.	.	.	.	.																					.	.	.	.	.	.	.	.						.	.	.	.	.
Query SS confidence				.	.																														.	.	.	.	.																					.	.	.	.	.	.	.	.						.	.	.	.	.
Query Sequence		I	I	.	.	T	F	H	P	E	A	S	E	H	V	D	R	T	L	Q	L	I	K	E	N	G	C	K	A	G	L	V	F	N	.	.	.	.	.	P	A	T	P	L	S	Y	L	D	Y	V	M	D	K	L	D	V	I	L	L	.	.	.	.	.	.	.	.	M	S	V	N	P	.	.	.	.	.	G	F	G	G
Query Conservation				.	.																														.	.	.	.	.																					.	.	.	.	.	.	.	.						.	.	.	.	.
Alig confidence				.	.																														.	.	.	.	.																					.	.	.	.	.	.	.	.						.	.	.	.	.
Template Conservation
Template Sequence		I	V	N	S	I	S	L	K	E	G	E	E	V	F	L	E	H	A	R	I	I	K	Q	Y	G	A	A	T	V	V	X	A	F	D	E	K	G	Q	A	D	T	A	A	R	K	I	E	V	C	E	R	A	Y	R	L	L	V	D	K	V	G	F	N	P	H	D	I	I	F	D	P	N	V	L	A	V	A	T	G	I
Template Known Secondary structure								S	T	T																T							S			T	T					S																			T				G	G	G											S	S	S
Template Predicted Secondary structure
Template SS confidence
		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.															.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Query Sequence		Q	S	F	I	P	Q	T	L	D	K	L	R	E	V	R	R	R	I	D	E	S	G	F	D	I	R	L	E	V	D	G	G	V	K	V	N	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	E	I	A	A	A	G	A	D	M	F	V	A	G	S	A	.	I	F	D	Q	P	D	Y	K	K	V	I
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation
Template Sequence		E	E	H	N	N	Y	A	V	D	F	I	E	A	T	G	W	I	R	K	N	L	P	G	A	H	V	S	G	G	V	S	N	L	S	F	S	F	R	G	N	N	Y	I	R	E	A	X	H	A	V	F	L	Y	H	A	I	Q	Q	G	X	D	X	G	I	V	N	P	G	S	V	L	Y	S	D	I	P	A	D	T	L
Template Known Secondary structure		G	G	G	T	T																S	T	T						B	G	G	G	G	G	G	G	G	T	T																			T	T													G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.
		213	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	M	R	S	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	K	I	E	D	V	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		611	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions