Job Description P0AG07 Confidence 98.17% Date Thu Jan 5 11:27:45 GMT 2012 Rank 152 Aligned Residues 210 % Identity 17% Template c3gvgA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:triosephosphate isomerase; PDBTitle: crystal structure of triosephosphate isomerase from mycobacterium2 tuberculosis Resolution 1.55 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.					.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70							.
Predicted Secondary structure																																	.	.	.	.																																							.	.	.	.	.	.
Query SS confidence																																	.	.	.	.																																							.	.	.	.	.	.
Query Sequence		K	Q	Y	L	I	A	P	S	I	L	S	A	D	F	A	R	L	G	E	D	T	A	K	A	L	A	A	G	A	D	V	.	.	.	.	V	H	F	D	V	M	D	N	H	Y	V	P	N	L	T	I	G	P	M	V	L	K	S	L	R	N	Y	G	I	T	A	P	I	D	V	H	L	M	.	.	.	.	.	.	V
Query Conservation																																	.	.	.	.																																							.	.	.	.	.	.
Alig confidence																																	.	.	.	.							.	.	.	.	.																												.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.
Template Sequence		K	P	L	I	A	G	N	W	K	M	N	L	N	H	Y	E	A	I	A	L	V	Q	K	I	A	F	S	L	P	D	K	Y	Y	D	R	V	D	V	A	V	I	.	.	.	.	.	P	P	F	T	D	L	R	S	V	Q	T	L	V	D	G	D	K	L	R	L	T	Y	G	A	Q	D	L	S	P	H	D	S	G	A
Template Known Secondary structure											S																		S		G	G	G	G	G	T							.	.	.	.	.			G	G	G											T	T		S						S				S	S	S	S	S	S
Template Predicted Secondary structure																																											.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.						.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.									.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.												.	.	.	.	.	130	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	P	V	D	R	I	V	P	D	F	A	A	A	G	A	S	I	I	T	F	H	.	.	.	.	.	.	.	.	P	E	A	S	E	H	V	D	R	T	L	Q	L	I	K	E	N	G	C	K	A	G	L	V	F	N	P	A	T	P	L	S	.	.	.	.	.	.	.	.	.	.	.	Y	L	D	Y	V	M	D	K
Query Conservation																							.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	T	G	D	V	S	G	A	F	L	A	K	L	G	C	S	Y	V	V	V	G	H	S	E	R	R	T	Y	H	N	E	D	D	A	L	V	A	A	K	A	A	T	A	L	K	H	G	L	T	P	I	V	C	I	G	E	H	L	D	V	R	E	A	G	N	H	V	A	H	N	I	E	Q	L	R	G	S	L	A	G
Template Known Secondary structure			T	T										T	T							S								S																	T	T																T	T														T	T	T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		133	.	.								.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.							.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.																															.	.	.	.	.	.																											.
Query SS confidence					.	.	.	.	.	.	.																															.	.	.	.	.	.																											.
Query Sequence		L	D	V	.	.	.	.	.	.	.	I	L	L	M	S	V	N	P	G	F	G	G	Q	S	F	I	P	Q	T	L	D	K	L	R	E	V	R	R	R	I	.	.	.	.	.	.	D	E	S	G	F	D	I	R	L	E	V	D	G	G	V	K	V	N	N	I	G	E	I	A	A	A	.	G	A	D	M	F	V	A
Query Conservation					.	.	.	.	.	.	.																															.	.	.	.	.	.																											.
Alig confidence					.	.	.	.	.	.	.																															.	.	.	.	.	.																											.
Template Conservation
Template Sequence		L	L	A	E	Q	I	G	S	V	V	I	A	Y	E	P	V	W	A	I	G	T	G	R	V	A	S	A	A	D	A	Q	E	V	C	A	A	I	R	K	E	L	A	S	L	A	S	P	R	I	A	D	T	V	R	V	L	Y	G	G	S	V	N	A	K	N	V	G	D	I	V	A	Q	D	D	V	D	G	G	L	V
Template Known Secondary structure								T	T								G	G	G	S	S	S	S																							S						T	T							S				T	T	T						T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	A	I	F	D	Q	P	D	Y	K	K	V	I	D	E	M	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	A	S	L	D	G	E	H	F	A	T	L	A	A	I	A	A
Template Known Secondary structure			G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions