Job Description P0AG07 Confidence 84.84% Date Thu Jan 5 11:27:45 GMT 2012 Rank 386 Aligned Residues 176 % Identity 13% Template c3g8rA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:probable spore coat polysaccharide biosynthesis protein e; PDBTitle: crystal structure of putative spore coat polysaccharide biosynthesis2 protein e from chromobacterium violaceum atcc 12472 Resolution 2.49 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30						.	.	.			.	.	.	.	.	.	40	.	.	.	.	.																.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																				.	.	.	.	.				.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.				.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	D	F	A	R	L	G	E	D	T	A	K	A	L	A	A	G	A	.	.	.	.	.	D	V	V	.	.	H	F	D	V	M	D	N	H	Y	V	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	I	G	P	M	V	L	K	S	L	R	N	Y	G	I	T	A	P	I	D	V	H	L	M
Query Conservation																				.	.	.	.	.				.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.				.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	N	V	E	H	G	V	A	L	I	R	A	I	R	E	S	C	Q	G	F	D	F	D	F	G	F	K	L	Q	Y	R	N	L	D	T	F	I	H	S	S	F	K	G	R	D	D	V	K	Y	V	K	R	F	E	E	T	R	L	Q	P	E	Q	X	Q	K	L	V	A	E	X	K	A	N	G	F	K	A	I	C	T
Template Known Secondary structure		T		S														T	T	T			S															S		G	G	G	T	T			S	S	S	S							T																	T	T
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.					.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.
Query SS confidence																																																															.	.	.	.
Query Sequence		V	K	P	V	D	R	I	V	P	D	F	A	A	A	G	A	S	I	I	T	F	H	P	E	A	S	E	H	V	D	R	T	L	Q	L	I	K	E	N	G	C	K	A	G	L	V	F	N	P	A	T	P	L	S	Y	L	D	Y	V	M	D	.	.	.	.	K	L	D	V	I	L	L	M	S	V	N	P	G	F	G
Query Conservation																																																															.	.	.	.
Alig confidence								.																								.																															.	.	.	.
Template Conservation								.																								.
Template Sequence		P	F	D	E	E	S	.	V	D	L	I	E	A	H	G	I	E	I	I	K	I	A	S	C	S	F	T	D	W	P	.	L	L	E	R	I	A	R	S	D	K	P	V	V	A	S	T	A	G	A	R	R	E	D	I	D	K	V	V	S	F	X	L	H	R	G	K	D	L	T	I	X	H	C	V	A	E	Y	P	T
Template Known Secondary structure				S				.							T	T								S	S	S	T	T				.							T	S		S							T	T															T	T	T												S	S
Template Predicted Secondary structure								.																								.
Template SS confidence
		98	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.				.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.
Query SS confidence																																		.	.	.
Query Sequence		G	Q	S	F	I	P	Q	T	L	D	K	L	R	E	V	R	R	R	I	D	E	S	G	F	D	I	R	L	E	V	D	G	.	.	.	G	V	K	V	N	N	I	G	E	I	A	A	A	G	A	D	M	F
Query Conservation																																		.	.	.
Alig confidence		.	.																	.	.	.	.											.	.	.
Template Conservation		.	.																	.	.	.	.
Template Sequence		.	.	P	D	D	H	L	H	L	A	R	I	K	T	L	R	Q	Q	.	.	.	.	Y	A	G	V	R	I	G	Y	S	T	H	E	D	P	D	L	X	E	P	I	X	L	A	V	A	Q	G	A	T	V	F
Template Known Secondary structure		.	.		G	G	G			T	T									.	.	.	.		T	T	S										S	S											T	T
Template Predicted Secondary structure		.	.																	.	.	.	.
Template SS confidence
				176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.					.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions