Job Description P0AG07 Confidence 95.12% Date Thu Jan 5 11:27:45 GMT 2012 Rank 304 Aligned Residues 159 % Identity 13% Template c3fa4D_ PDB info PDB header:lyase Chain: D: PDB Molecule:2,3-dimethylmalate lyase; PDBTitle: crystal structure of 2,3-dimethylmalate lyase, a pep mutase/isocitrate2 lyase superfamily member, triclinic crystal form Resolution 2.18 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70						.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.								.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.					110	.	.	.
Predicted Secondary structure																							.	.	.	.	.																							.	.	.	.	.	.	.																		.	.	.	.
Query SS confidence																							.	.	.	.	.																							.	.	.	.	.	.	.																		.	.	.	.
Query Sequence		P	M	V	L	K	S	L	R	N	Y	G	I	T	A	P	I	D	V	H	L	M	.	.	.	.	.	V	K	P	V	D	R	I	V	P	D	F	A	A	A	G	A	S	I	I	T	F	H	.	.	.	.	.	.	.	P	E	A	S	E	H	V	D	R	T	L	Q	L	I	K	E	N	.	.	.	.	G	C	K	A
Query Conservation																							.	.	.	.	.																							.	.	.	.	.	.	.																		.	.	.	.
Alig confidence																							.	.	.	.	.																							.	.	.	.	.	.	.																		.	.	.	.
Template Conservation
Template Sequence		R	A	N	A	E	M	I	S	N	I	S	P	S	T	P	V	I	A	D	A	D	T	G	Y	G	G	P	I	M	V	A	R	T	T	E	Q	Y	S	R	S	G	V	A	A	F	H	I	E	D	Q	V	Q	T	K	I	L	V	D	T	D	T	Y	V	T	R	I	R	A	A	V	Q	A	R	Q	R	I	G	S	D	I
Template Known Secondary structure												S	T	T	S							T	T		S	S	S														T	T									B						B																					T
Template Predicted Secondary structure
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		114	.	.	.	.	.	120	.	.									.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.										.
Query SS confidence											.	.	.	.	.	.	.	.										.
Query Sequence		G	L	V	F	N	P	A	T	P	.	.	.	.	.	.	.	.	L	S	Y	L	D	Y	V	M	D	.	K	L	D	V	I	L	L	M	S	V	N	P	G	F	G	G	Q	S	F	I	P	Q	T	L	D	K	L	R	E	V	R	R	R	I	D	E	S	G	F	D	I	R	L	E	V	D	G	G	V	K	V	N	N
Query Conservation											.	.	.	.	.	.	.	.										.
Alig confidence											.	.	.	.	.	.	.	.										.							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	I	A	R	T	D	S	L	Q	T	H	G	Y	E	E	S	V	A	R	L	R	A	A	R	D	A	G	A	D	V	G	F	.	.	.	.	.	.	.	.	.	.	.	L	E	G	I	T	S	R	E	M	A	R	Q	V	I	Q	D	L	A	G	W	P	L	L	L	N	M	V	E	H	G	A	T	P	S	I	S
Template Known Secondary structure																													T		S				.	.	.	.	.	.	.	.	.	.	.		T	T														T	T	T	S		B						T	T	S	S	S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.												190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	E	I	A	A	A	G	A	D	M	F	V	A	G	S	A	I	F	D	Q	P	D	Y	K	K	V	I	D	E	M	R	S	E	L	A	K	V	S	H
Query Conservation
Alig confidence																					.	.	.	.	.
Template Conservation																					.	.	.	.	.
Template Sequence		A	A	E	A	K	E	M	G	F	R	I	I	I	F	P	F	A	A	L	.	.	.	.	.	G	P	A	V	A	A	M	R	E	A	M	E	K	L	K	R
Template Known Secondary structure									T		S					T	T	T	T		.	.	.	.	.
Template Predicted Secondary structure																					.	.	.	.	.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.						.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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