Job Description P0AG07 Confidence 94.79% Date Thu Jan 5 11:27:45 GMT 2012 Rank 312 Aligned Residues 157 % Identity 13% Template c3eooL_ PDB info PDB header:lyase Chain: L: PDB Molecule:methylisocitrate lyase; PDBTitle: 2.9a crystal structure of methyl-isocitrate lyase from2 burkholderia pseudomallei Resolution 2.90 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.						.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.																.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	M	V	L	K	S	L	R	N	Y	G	I	T	A	P	I	D	V	H	.	.	.	.	.	L	M	V	K	P	V	D	R	I	V	P	D	F	A	A	A	G	A	S	I	I	T	F	H	P	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	H	V	D	R	T	L	Q	L	I	K	E	N
Query Conservation																					.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.									.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.
Template Sequence		L	V	D	A	N	R	I	T	N	A	.	T	N	L	P	L	L	V	D	I	D	T	G	W	G	G	A	F	N	I	A	R	T	I	R	S	F	I	K	A	G	V	G	A	V	H	L	E	D	Q	V	G	Q	K	R	C	G	H	R	P	G	K	E	C	V	P	A	G	E	M	V	D	R	I	K	A	A	V	D	A
Template Known Secondary structure												.			S							T	T		S	S	S														T	T		S							B						T	T							B
Template Predicted Secondary structure												.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.											.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.										.
Query SS confidence															.	.	.	.	.	.	.	.	.	.										.
Query Sequence		G	C	K	A	G	L	V	F	N	P	A	T	P	.	.	.	.	.	.	.	.	.	.	L	S	Y	L	D	Y	V	M	D	.	K	L	D	V	I	L	L	M	S	V	N	P	G	F	G	G	Q	S	F	I	P	Q	T	L	D	K	L	R	E	V	R	R	R	I	D	E	S	G	F	D	I	R	L	E	V	D	G
Query Conservation															.	.	.	.	.	.	.	.	.	.										.
Alig confidence															.	.	.	.	.	.	.	.	.	.										.										.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.															.	.
Template Sequence		R	T	D	E	T	F	V	I	M	A	R	T	D	A	A	A	A	E	G	I	D	A	A	I	E	R	A	I	A	Y	V	E	A	G	A	D	M	I	F	P	E	A	.	.	.	.	.	.	.	.	.	.	.	M	K	T	L	D	D	Y	R	R	F	K	E	A	V	.	.	K	V	P	I	L	A	N	L	T	E	F
Template Known Secondary structure			S		T	T	S																												T		S							.	.	.	.	.	.	.	.	.	.	.			S												.	.		S		B						T	T
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.															.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.												.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.
		179	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		G	V	K	V	N	.	N	I	G	E	I	A	A	A	G	A	D	M	F	V	A	G	S	A	I	F	D	Q	P	D	Y	K	K	V	I	D	E	M	R	S	E	L	A	K	V	S	H	E
Query Conservation							.
Alig confidence							.																					.	.	.	.	.
Template Conservation																												.	.	.	.	.
Template Sequence		G	S	T	P	L	F	T	L	D	E	L	K	G	A	N	V	D	I	A	L	Y	C	C	G	A	Y	.	.	.	.	.	R	A	M	N	K	A	A	L	N	F	Y	E	T	V	R	R	D
Template Known Secondary structure		S	S	S											T	T								S				.	.	.	.	.
Template Predicted Secondary structure																												.	.	.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.						.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions