Job Description P0AG07 Confidence 79.73% Date Thu Jan 5 11:27:45 GMT 2012 Rank 401 Aligned Residues 187 % Identity 12% Template c3eb2A_ PDB info PDB header:lyase Chain: A: PDB Molecule:putative dihydrodipicolinate synthetase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 rhodopseudomonas palustris at 2.0a resolution Resolution 2.04 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60						.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.				.	.	80	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.																		.	.	.
Query SS confidence																																																			.	.	.	.	.																		.	.	.
Query Sequence		S	A	D	F	A	R	L	G	E	D	T	A	K	A	L	A	A	G	A	D	V	V	H	F	D	V	M	D	N	H	Y	V	P	N	L	T	I	G	P	M	V	L	K	S	L	R	N	Y	G	.	.	.	.	.	I	T	A	P	I	D	V	H	L	M	V	K	P	V	D	R	I	.	.	.	V	P	D	F	A	A
Query Conservation																																																			.	.	.	.	.																		.	.	.
Alig confidence																								.	.	.																									.	.	.	.	.																		.	.	.
Template Conservation																								.	.	.
Template Sequence		R	V	R	A	D	V	M	G	R	L	C	D	D	L	I	Q	A	G	V	H	G	L	.	.	.	T	P	L	G	S	T	G	E	F	A	Y	L	G	T	A	Q	R	E	A	V	V	R	A	T	I	E	A	A	Q	R	R	V	P	V	V	A	G	V	A	S	T	S	V	A	D	A	V	A	Q	A	K	L	Y	E	K
Template Known Secondary structure			B															T	T		S		B	.	.	.	B	T	T	S	G	G	G	T	G	G	G																		T	T	S	S		B							S	S
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.				.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.						.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.						.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure												.	.	.	.	.																.														.	.	.	.	.
Query SS confidence												.	.	.	.	.																.														.	.	.	.	.
Query Sequence		A	G	A	S	I	I	T	F	H	P	.	.	.	.	.	E	A	S	E	H	V	D	R	T	L	Q	L	I	K	E	.	N	G	C	K	A	G	L	V	F	N	P	A	T	.	.	.	.	.	P	L	S	Y	L	D	Y	V	M	D	K	L	D	V	I	L	L	M	S	V	N	P	G	F	G	G	Q	S	F	I	P
Query Conservation												.	.	.	.	.																.														.	.	.	.	.
Alig confidence												.	.	.	.	.																.														.	.	.	.	.																.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	A	D	G	I	L	A	I	L	E	A	Y	F	P	L	K	D	A	Q	I	E	S	Y	F	R	A	I	A	D	A	V	E	I	P	V	V	I	Y	T	N	P	Q	F	Q	R	S	D	L	T	L	D	V	I	A	R	L	A	E	H	P	R	I	R	.	.	.	.	.	.	.	.	.	.	Y	I	K	D	A	S
Template Known Secondary structure			T		S									S	S																			S	S								T	T	T		S	S												T	S	T	T			.	.	.	.	.	.	.	.	.	.						S
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.											.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	L	D	K	L	R	E	V	R	R	R	I	D	E	S	G	F	D	I	R	L	E	V	D	G	G	V	K	V	N	N	I	G	E	I	A	A	A	G	A	D	M	F	V	A	G	S	A	I	F	D	Q	P	D	Y	K	K	V	I	D	E	M	R	S
Query Conservation
Alig confidence																	.	.	.	.	.										.
Template Conservation																	.	.	.	.	.										.
Template Sequence		T	N	T	G	R	L	L	S	I	I	N	R	C	G	D	.	.	.	.	.	A	L	Q	V	F	S	A	S	A	.	H	I	P	A	A	V	M	L	I	G	G	V	G	W	M	A	G	P	A	C	I	A	P	R	Q	S	V	A	L	Y	E	L	C	K	A
Template Known Secondary structure		S													G	G	.	.	.	.	.	G	S						T	T	.	S								T	T							G	G	G	G	T														T
Template Predicted Secondary structure																	.	.	.	.	.										.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.						.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions