Job Description P0AG07 Confidence 77.78% Date Thu Jan 5 11:27:45 GMT 2012 Rank 407 Aligned Residues 219 % Identity 15% Template c3e02A_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:uncharacterized protein duf849; PDBTitle: crystal structure of a duf849 family protein (bxe_c0271) from2 burkholderia xenovorans lb400 at 1.90 a resolution Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.													.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.																					.	.					.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.																					.	.					.
Query Sequence		K	Q	Y	L	I	A	P	S	I	L	S	A	.	.	.	.	.	.	.	.	.	.	.	.	D	F	A	R	L	G	E	D	T	A	K	A	L	A	A	G	A	D	V	V	.	.	H	F	D	V	.	M	D	N	H	Y	V	P	N	L	T	I	G	P	M	V	L	K	S	L	R	N	Y	G	I	T	A	P	I	D
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.																					.	.					.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.																					.	.					.
Template Conservation
Template Sequence		K	K	I	I	I	T	C	A	V	T	G	S	I	H	T	P	T	X	S	P	Y	L	P	I	T	P	E	E	I	V	K	E	G	V	A	A	A	E	A	G	A	A	X	L	H	L	H	A	R	D	P	L	N	G	R	P	S	Q	D	P	D	L	F	X	R	F	L	P	Q	L	K	E	R	T	D	A	I	L	N	I
Template Known Secondary structure		S	S	B							S		S	S	S		G	G	G		T	T	S			S															T		S									T	T	T											T	T	T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
				67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90																																				.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	V	H	L	M	V	K	P	V	D	R	I	V	P	D	F	A	A	A	G	A	S	I	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	H	P	E	A	S	E	H	V	D	R	T	L	Q	L	I	K	E	N
Query Conservation		.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	T	G	G	G	L	G	X	S	L	D	E	R	L	A	P	A	R	A	A	R	P	E	V	A	S	X	N	X	G	S	L	N	F	N	I	S	Q	A	A	A	K	F	D	T	F	K	F	D	W	E	R	P	Y	L	A	G	T	R	D	F	I	L	S	N	T	F	S	Q	I	E	R	G	X	T	E	L	G	A	S
Template Known Secondary structure			S	S		S	T	T																S							S					B		G	G	G	G	G	G		S			S	S	T	T								G	G	G																			T	T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.				.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.
Query SS confidence																									.	.	.
Query Sequence		G	C	K	A	G	L	V	F	N	P	A	T	P	L	S	Y	L	D	Y	V	M	D	K	.	.	.	L	D	V	I	L	L	M	S	V	N	P	G	F	G	G	Q	S	F	I	P	Q	T	L	D	K	L	R	E	V	R	R	R	I	D	E	S	G	F	D	I	R	L	E	V	D	G	G	V	K	V	N	N	I	G
Query Conservation																									.	.	.
Alig confidence																									.	.	.
Template Conservation
Template Sequence		G	T	R	F	E	F	E	C	Y	D	V	G	H	L	Y	N	L	A	H	F	V	D	R	K	L	V	E	P	P	F	F	L	Q	C	V	F	G	I	L	G	G	I	G	A	D	P	E	N	L	L	H	X	R	T	I	A	D	R	L	F	G	Q	D	Y	Y	L	S	V	L	A	A	G	R	H	Q	X	P	F	V	T
Template Known Secondary structure		T									S													T	T	S	S		S											B	T	S			S																	T	T	S									G	G	G
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.			.	.						.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																	.	.			.	.	.	.	.
Query SS confidence																	.	.			.	.	.	.	.
Query Sequence		E	I	A	A	A	G	A	D	M	F	V	A	G	S	A	.	.	I	F	.	.	.	.	.	D	Q	P	D	Y	K	K	V	I	D	E	M	R	S	E	L	A	K
Query Conservation																	.	.			.	.	.	.	.
Alig confidence										.							.	.			.	.	.	.	.
Template Conservation										.
Template Sequence		X	S	A	I	L	G	G	N	.	V	R	V	G	L	E	D	S	L	Y	S	G	K	G	Q	L	A	T	S	N	A	E	Q	V	R	K	I	R	R	I	I	E	E
Template Known Secondary structure						T	T			.				S	T	T	T		S				T	T				S
Template Predicted Secondary structure										.
Template SS confidence
		245	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions